MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-079B05
Chromosome	17 (Build37)
Map Location	16,390,399 - 16,391,003
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC664953, Dll1, LOC100041314, 4932442K08Rik, Psmb1, Tbp, Pdcd2, LOC636398, Prdm9, EG626573, LOC665017, LOC100041775, 5830433I10Rik, Chd1, Rgmb, LOC100041365, Eif3s6-ps3
Downstream gene	LOC100041383, LOC100041394, LOC213781, LOC100041407, LOC665072, EG383211, LOC626785, LOC665085, BC002059, BC018101, Zfp97, EG382161
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC664953 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:664953
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 ESTs, 5 Proteins pseudo : _no_value

name	Dll1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13388 MGI:104659
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041314 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041314
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	4932442K08Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67544 MGI:1914794
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Psmb1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19170 MGI:104884
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tbp (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21374 MGI:101838
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pdcd2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18567 MGI:104643
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC636398 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:636398
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 ESTs, 8 Proteins pseudo : _no_value

name	Prdm9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:213389 MGI:2384854
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins

name	EG626573 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:626573 MGI:3646669
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins

name	LOC665017 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665017
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 60 ESTs, 15 Proteins pseudo : _no_value

name	LOC100041775 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041775
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins pseudo : _no_value

name	5830433I10Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76030 MGI:1923280
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Chd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12648 MGI:88393
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rgmb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68799 MGI:1916049
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041365 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041365
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Eif3s6-ps3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16344 MGI:103213
definition	gene_synonym : Int6-ps3 note : eukaryotic translation initiation factor 3, subunit 6, pseudogene 3 pseudo : _no_value

name	LOC100041383 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041383
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC100041394 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041394
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC213781 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:213781
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 495 ESTs, 13 Proteins pseudo : _no_value

name	LOC100041407 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041407
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 85 ESTs, 8 Proteins

name	LOC665072 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665072
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 Proteins pseudo : _no_value

name	EG383211 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:383211 MGI:3644871
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 17 Proteins pseudo : _no_value

name	LOC626785 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:626785
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 211 ESTs, 5 Proteins pseudo : _no_value

name	LOC665085 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665085
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 86 ESTs, 16 Proteins pseudo : _no_value

name	BC002059 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:213811 MGI:2384864
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	BC018101 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:449000 MGI:3052731
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zfp97 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22759 MGI:105921
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG382161 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:382161 MGI:3646034
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 1 Protein

name	Dll1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40789271 GeneID:13388 MGI:104659
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : delta-like 1 (Drosophila) transcript_id : NM_007865.2

name	LOC100041314 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268477 GeneID:100041314
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100041314 transcript_id : XM_001476140.1

name	4932442K08Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:75905502 GeneID:67544 MGI:1914794
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4932442K08 gene transcript_id : NM_024203.3

name	Psmb1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142388089 GeneID:19170 MGI:104884
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : proteasome (prosome, macropain) subunit, beta type 1 transcript_id : NM_011185.3

name	Tbp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:111185894 GeneID:21374 MGI:101838
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : TATA box binding protein transcript_id : NM_013684.2

name	Pdcd2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:120407032 GeneID:18567 MGI:104643
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : programmed cell death 2 transcript_id : NM_008799.2

name	Prdm9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268533 GeneID:213389 MGI:2384854
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins product : PR domain containing 9, transcript variant 1 transcript_id : XM_619431.4

name	EG626573 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94401649 GeneID:626573 MGI:3646669
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins product : predicted gene, EG626573 transcript_id : XM_891173.2

name	5830433I10Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268481 GeneID:76030 MGI:1923280
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : RIKEN cDNA 5830433I10 gene transcript_id : XM_974092.2

name	Chd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142365793 GeneID:12648 MGI:88393
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chromodomain helicase DNA binding protein 1 transcript_id : NM_007690.2

name	Rgmb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:32490564 GeneID:68799 MGI:1916049
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RGM domain family, member B transcript_id : NM_178615.3

name	LOC100041407 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268483 GeneID:100041407
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 85 ESTs, 8 Proteins product : similar to B-myb transcript_id : XM_001476338.1

name	BC002059 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21703793 GeneID:213811 MGI:2384864
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC002059 transcript_id : NM_145397.1

name	BC018101 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:52851394 GeneID:449000 MGI:3052731
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC018101 transcript_id : NM_001005358.1

name	Zfp97 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110815835 GeneID:22759 MGI:105921
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 97 transcript_id : NM_011765.4

name	EG382161 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268488 GeneID:382161 MGI:3646034
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 1 Protein product : predicted gene, EG382161, transcript variant 1 transcript_id : XM_356261.6

name	Dll1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40789272 GeneID:13388 MGI:104659
definition	GO_component : GO:0031410 - cytoplasmic vesicle [Evidence IDA]; GO:0005576 - extracellular region [Evidence ISS]; GO:0005887 - integral to plasma membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005112 - Notch binding [Evidence IPI]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0009912 - auditory receptor cell fate commitment [Evidence NAS]; GO:0007154 - cell communication [Evidence IEA]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0001709 - cell fate determination [Evidence ISS]; GO:0007386 - compartment specification [Evidence IMP]; GO:0007368 - determination of left/right symmetry [Evidence IMP]; GO:0007275 - development [Evidence IEA]; GO:0001701 - embryonic development (sensu Mammalia) [Evidence NAS]; GO:0030097 - hemopoiesis [Evidence ISS]; GO:0048839 - inner ear development [Evidence IMP]; GO:0042472 - inner ear morphogenesis [Evidence NAS]; GO:0045608 - negative regulation of auditory receptor cell differentiation [Evidence IMP]; GO:0045596 - negative regulation of cell differentiation [Evidence IMP]; GO:0007399 - nervous system development [Evidence NAS]; GO:0007219 - Notch signaling pathway [Evidence ISS] [Evidence IEA]; GO:0042475 - odontogenesis (sensu Vertebrata) [Evidence NAS]; GO:0009887 - organ morphogenesis [Evidence NAS]; GO:0030155 - regulation of cell adhesion [Evidence ISS]; GO:0001757 - somite specification [Evidence IMP]; GO:0001756 - somitogenesis [Evidence IGI] codon_start : 1 note : delta like-1 product : delta-like 1 protein_id : NP_031891.2

name	LOC100041314 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268478 GeneID:100041314
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476190.1

name	4932442K08Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51988904 GeneID:67544 MGI:1914794
definition	GO_function : GO:0004527 - exonuclease activity [Evidence IEA] codon_start : 1 product : PPARgamma constitutive coactivator 1 protein_id : NP_077165.2

name	Psmb1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7242197 CCDS:CCDS28411.1 GeneID:19170 MGI:104884
definition	GO_component : GO:0005829 - cytosol [Evidence IEA]; GO:0005839 - proteasome core complex (sensu Eukaryota) [Evidence IEA]; GO:0043234 - protein complex [Evidence IEA] GO_function : GO:0004175 - endopeptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0004298 - threonine endopeptidase activity [Evidence IEA] GO_process : GO:0006511 - ubiquitin-dependent protein catabolism [Evidence IEA] codon_start : 1 note : proteasome beta-subunit C5; proteasome subunit C5 product : proteasome (prosome, macropain) subunit, beta type 1 protein_id : NP_035315.1

name	Tbp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:111185895 GeneID:21374 MGI:101838
definition	GO_component : GO:0005634 - nucleus [Evidence IDA]; GO:0000120 - RNA polymerase I transcription factor complex [Evidence TAS]; GO:0005667 - transcription factor complex [Evidence IEA]; GO:0005669 - transcription factor TFIID complex [Evidence IEA] [Evidence ISS] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003702 - RNA polymerase II transcription factor activity [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence TAS] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0006367 - transcription initiation from RNA polymerase II promoter [Evidence IEA] codon_start : 1 note : TFIID core protein; TATA-binding protein; TATA binding protein product : TATA box binding protein protein_id : NP_038712.2

name	Pdcd2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:120407033 CCDS:CCDS28413.1 GeneID:18567 MGI:104643
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IEA] codon_start : 1 note : programmed cell death protein 2 product : programmed cell death 2 protein_id : NP_032825.2

name	Prdm9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149268534 GeneID:213389 MGI:2384854
definition	codon_start : 1 product : PR-domain zinc finger protein isoform 1 protein_id : XP_619431.3

name	EG626573 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82986575 GeneID:626573 MGI:3646669
definition	codon_start : 1 product : similar to mitochondrial ribosomal protein S21 protein_id : XP_896266.1

name	5830433I10Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149268482 GeneID:76030 MGI:1923280
definition	codon_start : 1 product : hypothetical protein LOC76030 protein_id : XP_979186.2

name	Chd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680928 CCDS:CCDS28416.1 GeneID:12648 MGI:88393
definition	GO_component : GO:0000785 - chromatin [Evidence IEA]; GO:0005634 - nucleus [Evidence NAS] [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0008026 - ATP-dependent helicase activity [Evidence IEA]; GO:0003682 - chromatin binding [Evidence IEA] [Evidence NAS]; GO:0003677 - DNA binding [Evidence IEA]; GO:0004386 - helicase activity [Evidence NAS] [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006333 - chromatin assembly or disassembly [Evidence NAS] [Evidence IEA] codon_start : 1 exception : mismatches in translation product : chromodomain helicase DNA binding protein 1 protein_id : NP_031716.1

name	Rgmb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:32490565 GeneID:68799 MGI:1916049
definition	GO_component : GO:0046658 - anchored to plasma membrane [Evidence IDA]; GO:0005793 - ER-Golgi intermediate compartment [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0048503 - GPI anchor binding [Evidence IEA]; GO:0042802 - identical protein binding [Evidence IDA] GO_process : GO:0030509 - BMP signaling pathway [Evidence IDA]; GO:0007155 - cell adhesion [Evidence IDA] codon_start : 1 product : repulsive guidance molecule B protein_id : NP_848730.2

name	LOC100041407 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268484 GeneID:100041407
definition	codon_start : 1 product : similar to B-myb protein_id : XP_001476388.1

name	BC002059 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21703794 GeneID:213811 MGI:2384864
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : hypothetical protein LOC213811 protein_id : NP_663372.1

name	BC018101 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:52851395 GeneID:449000 MGI:3052731
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC449000 protein_id : NP_001005358.1

name	Zfp97 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110815836 GeneID:22759 MGI:105921
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : zinc finger protein 97 protein_id : NP_035895.2

name	EG382161 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149268489 GeneID:382161 MGI:3646034
definition	codon_start : 1 product : similar to CDNA sequence BC018101 isoform 1 protein_id : XP_356261.6

name	LOC100041365 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041365
definition	number : 2 pseudo : _no_value

name	LOC100041365 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041365
definition	number : 1 pseudo : _no_value

name	LOC100041383 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041383
definition	number : 3 pseudo : _no_value

name	LOC100041383 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041383
definition	number : 2 pseudo : _no_value

name	LOC100041383 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041383
definition	number : 1 pseudo : _no_value

name	LOC100041394 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041394
definition	number : 1 pseudo : _no_value

name	LOC100041394 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041394
definition	number : 2 pseudo : _no_value

name	LOC100041394 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041394
definition	number : 3 pseudo : _no_value

name	LOC665072 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665072
definition	number : 1 pseudo : _no_value

name	LOC665072 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665072
definition	number : 2 pseudo : _no_value

name	LOC665072 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665072
definition	number : 3 pseudo : _no_value

name	LOC664953 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149268528 GeneID:664953
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 ESTs, 5 Proteins product : similar to ubiquitin-conjugating enzyme E2L 3 pseudo : _no_value transcript_id : XR_033414.1

name	LOC636398 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149268479 GeneID:636398
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 ESTs, 8 Proteins product : similar to zinc finger protein 91 pseudo : _no_value transcript_id : XR_032603.1

name	LOC665017 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149268480 GeneID:665017
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 60 ESTs, 15 Proteins product : similar to Odc1 protein pseudo : _no_value transcript_id : XR_032613.1

name	LOC100041775 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149268537 GeneID:100041775
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins product : similar to integrin beta 3 binding protein pseudo : _no_value transcript_id : XR_033510.1

name	LOC213781 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149268548 GeneID:213781
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 495 ESTs, 13 Proteins product : similar to ribosomal protein L7a pseudo : _no_value transcript_id : XR_033527.1

name	EG383211 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149268485 GeneID:383211 MGI:3644871
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 17 Proteins product : predicted gene, EG383211 pseudo : _no_value transcript_id : XR_001688.2

name	LOC626785 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149268553 GeneID:626785
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 211 ESTs, 5 Proteins product : similar to Lysosomal-associated protein transmembrane 4B pseudo : _no_value transcript_id : XR_033531.1

name	LOC665085 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149268486 GeneID:665085
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 86 ESTs, 16 Proteins product : similar to cyclin B pseudo : _no_value transcript_id : XR_032712.1

clone name	MSMg01-472I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-189F04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-068B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-057E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-216N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063M05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-446N24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-303O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-509K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-196N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-104K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-348L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-096C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-293M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-210E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-370A15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-172C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-365H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-138H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-209J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-274F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330J09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-192N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-168G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-070J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-396O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-099P24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-218J09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-197C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-158A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-464N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-076M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-079B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-049A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411F01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-379G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-294A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-045H22
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-279G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-547L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-375F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-360G08
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-296M08
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-296N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143F14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-234O05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-494F06
singlet/doublet	doublet
plural/unique	plural

clone name	B6Ng01-331J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042P05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104O01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-171D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269P06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116O15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338B11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349E07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183K23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133P05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-334A13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284A13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148A14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-267O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104D09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123C11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-268N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054H22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-314I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014I22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098E04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-173K15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144B04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285C07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016I13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201O13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-250B20
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-079B05.T7 (MSMg01no079_b05.b1)	MSMg01-079B05.TJ (MSMg01no079_b05.g1)
ACC	AG300256	AG300257
length	704	704
length of high quality (start - end)	664 (41 - 704)	605 (73 - 677)
definition	CHROMAT_FILE: MSMg01no079_b05.b1 PHD_FILE: MSMg01no079_b05.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:27:35 2005	CHROMAT_FILE: MSMg01no079_b05.g1 PHD_FILE: MSMg01no079_b05.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:27:36 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	CAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCAGAGATCCGCGGAATT CCATGAGCAAATCTTTGTTTAAGAAATAGAATGGGGGGAGGGCTCTGCCA GAGCAGGTGGGGAAGCCATCTTGGGTCACGGATTCCCTGGAAGACTAGTC TGCACAGGTAAGAGTGTGGACTACAGAAGCGACACAGCTTCTTGAACAGG CAGAAGCAACACAGCTTCTGGGACAGACCCCATTTCAGGCTGCAGACATC CTGGCAACATCCCCACTAGAGGAGAGGTGCCTGCCTGGGAGGGCTCTGCC TGAGCAGGTGGGGGAGTCATCTTGGGTCCCAGATCCCTCAGAGACTAGTC TGCACAGGTGAGAGTGTGGACTACAGAAACAACAGAGCTTCTTAGACAGG CAGACTAGACAAAGCTTCTGGGACAGGCCCTGTTTCGGCCCTTATCTTTA GCCAGGAGGCAGGTCTGAATGCCAGATATCTGTGCACCTTCCCTGCAAGA GGAGAGTTTGCTTATAGAGAGTACTCCGACCACTGAGACTCAGGAGAGAG CTAGACTTCCAGGTCAGCTGACAGAGGCTAACAGAATCACAAGAAGAACA AGCTCCAACCAGAGACAACTATAACAACTAAATCCAGAGATCATGAGATG GCTAAAGGCAAACGTAAGAATCTTACGAGCAGAAACCAAGACCACTCACC ATCA	AATGCTGTGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXACTTATAACTGCCACAGTAAATATCACC CTACCAAAAGTAAACTTTATTCTAATTTTTATACTCTTAATTAAACCTGT TCCTGAAATCCATATAGATTTTTATCATCTATACTGATTCAGCTTGTGTT TATTTATTTAAGATGCTTTATGTAATAGTAGCTTGGTTTTTAAAAAAATA CTGTGTAGTATTCTGTTGTGAACATATCACAATTCCCTTTTTTCCATTGT ACCTCTTCAAGATACGCCATGTTGGTTGCCCTCATATTTTGGATGTCACC AATAAGGCCTCTGTGAACACATTGTAAATGTCTTCTGTTGCACCATGACC CCACCCCATTCTTCATTCATAGATATATGAATGAAGTGGCATTATTGAGC CACAGGACATGGGACAAATGACACTAGTAAGTCATGCCAAGCAGTTTTCC AGTGACTGAACCACTTTAATTTCCATATTAGCCCCTTCACAACATTGTGT GATTTGACTATTGAGTTGCATGTAGCTCTAGGATTTATGTTTTCAGTGGG TATGTTGTGTATTAATATTTATTCGTGTCAATCCATTCTAATACTGAAAT GCATGTAGGTTTTGAGCCAGGATTGTAGCACACGGCCGTCTTTCCCTTCT TGTA
quality values	Open. Hide. 16 16 16 16 16 25 16 30 23 15 10 11 15 26 22 33 33 33 31 43 43 43 27 23 10 12 12 23 21 22 10 10 10 13 10 10 15 10 8 8 12 19 28 44 44 36 36 36 50 37 37 36 36 36 37 47 48 48 48 43 30 30 25 28 28 32 34 39 41 46 39 39 46 42 42 23 27 10 10 11 23 23 47 50 57 57 54 57 57 57 57 57 57 48 50 57 50 48 47 47 50 50 57 57 57 57 57 57 57 57 57 48 57 42 57 48 47 47 50 57 57 57 57 57 50 50 50 50 50 50 57 57 57 57 57 57 57 57 52 43 43 52 57 52 52 52 37 50 52 52 57 57 54 54 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 45 43 57 43 45 45 57 57 57 57 57 57 57 57 57 57 57 52 52 57 57 52 52 52 57 57 57 52 52 52 62 62 62 62 62 52 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 52 62 62 62 62 62 62 62 62 45 52 52 52 62 62 62 62 62 52 62 62 62 62 62 62 62 62 52 52 62 62 52 62 62 68 68 62 62 62 62 62 62 62 52 52 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 43 52 52 62 62 62 62 52 52 62 62 52 62 62 62 62 62 62 62 52 52 52 62 62 62 62 62 62 62 54 62 62 62 52 52 62 62 62 52 52 52 62 62 62 62 52 52 52 52 62 62 62 62 62 62 62 62 62 62 52 52 52 62 62 62 62 62 62 62 62 62 62 47 59 59 62 52 62 62 62 62 62 62 62 62 62 62 62 62 39 43 43 52 62 62 62 62 52 52 43 62 62 68 68 68 68 68 68 68 68 62 62 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 57 57 57 59 59 57 57 59 57 57 68 57 57 57 57 57 59 59 59 59 59 59 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 59 59 59 57 57 57 57 57 57 68 68 68 68 68 68 59 59 59 59 57 57 57 57 57 54 54 57 57 57 57 50 57 43 50 50 46 43 57 57 57 57 57 57 57 57 57 68 68 68 68 59 59 59 57 54 54 54 57 54 54 54 59 57 57 57 48 48 48 57 57 59 54 54 48 57 43 43 43 46 48 48 43 37 37 37 37 43 46 46 57 48 48 48 48 43 39 37 42 33 40 30 32 37 40 43 48 48 57 57 43 48 48 43 43 43 48 48 48 46 46 46 41 41 43 39 32 34 31 37 32 39 39 46 46 48 48 48 40 47 39 28 28 28 29 26 29 35 39 39 39 46 46 46 48 48 48 59 59 47 39 39 39 39 30 34 33 39 39 39 39 40 40 47 47 47 41 41 31 29 37 25 25 30 32 32 30 34 29 32 37 37 36 32 31 31 23 24 11 11	Open. Hide. 8 8 8 8 9 9 9 17 7 7 7 10 19 22 25 28 28 37 37 25 24 22 18 18 30 41 41 37 23 18 10 10 12 12 11 11 11 12 21 21 31 33 33 33 33 35 35 30 36 36 36 38 50 50 53 53 50 47 42 42 28 34 34 23 23 21 24 43 43 48 48 46 46 46 50 57 57 54 54 54 54 48 42 41 41 47 42 42 50 48 57 43 43 42 48 50 46 41 41 47 57 57 57 57 57 57 54 54 57 57 57 68 57 57 44 46 57 57 57 57 57 57 57 57 54 54 57 57 57 57 57 57 57 57 57 57 57 50 57 57 57 57 52 52 52 57 57 57 57 57 57 57 57 57 57 50 41 52 52 57 52 52 52 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 52 57 57 59 57 57 57 57 57 57 57 57 57 62 62 52 52 52 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 52 52 52 52 62 62 62 62 52 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 52 52 62 62 62 62 62 62 62 62 62 52 62 62 62 62 68 62 62 62 62 62 62 62 62 62 62 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 45 45 62 62 62 62 62 62 62 39 43 43 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 54 62 62 62 62 52 52 52 62 62 52 52 43 43 43 43 62 52 62 62 62 62 62 62 62 62 62 62 62 62 59 59 43 52 52 52 52 62 62 62 62 62 62 62 62 62 62 62 62 52 52 62 62 62 62 62 62 62 62 62 62 62 62 62 68 62 62 62 52 52 43 62 62 62 62 62 62 62 62 62 68 68 68 68 68 68 68 62 44 43 27 27 23 44 44 62 57 59 59 59 59 59 43 43 43 43 43 57 57 44 57 45 45 42 43 42 43 57 52 57 52 52 52 47 57 43 39 39 43 38 39 39 42 45 44 44 52 52 52 57 57 57 52 57 57 59 57 54 52 57 52 59 57 59 52 52 52 52 52 57 57 57 57 50 50 38 43 43 52 52 57 57 57 57 68 68 57 59 54 54 54 57 43 43 47 47 43 44 44 59 59 57 57 54 54 57 57 57 57 57 57 59 59 48 48 48 57 44 57 46 46 47 47 47 47 57 44 57 46 43 43 43 43 47 43 48 41 34 25 20 20 25 32 42 48 57 57 54 57 57 57 48 48 42 42 42 43 43 37 37 30 32 28 28 25 25 25 34 34 39 34 26 21 14 14 21 28 34 32 31 35 36 39 39 40 40 37 37 28 28 22 29 29 22 22 28 37 37 28 30 30 40 37 43 43 43 48 37 34 23 32 23 23 31 28 23 20 15 15 15 15 15 13 13 15 26 32 47 47 35 36 28 31 35 21 21 27 30 25 20 22 11 11 12 26 28 30 18 16 14 16 15 10 12 12 27 16 14 14 14 18 16 14 15 11 19 19 11 11

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no079_b05.g1 MSMg01no079_b05.g1 CHROMAT_FILE:
MSMg01no079_b05.g1 PHD_FILE: MSMg01no079_b05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:27:36 2005
         (605 letters)



>mm_chr17_16390199_16391203
          Length = 1005

 Score = 1147 bits (593), Expect = 0.0
 Identities = 602/605 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   acttataactgccacagtaaatatcaccctaccaaaagtaaactttattctaatttttat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acttataactgccacagtaaatatcaccctaccaaaagtaaactttattctaatttttat 260

                                                                       
Query: 61  actcttaattaaacctgttcctgaaatccatatagatttttatcatctatactgattcag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 actcttaattaaacctgttcctgaaatccatatagatttttatcatctatactgattcag 320

                                                                       
Query: 121 cttgtgtttatttatttaagatgctttatgtaatagtagcttggtttttaaaaaaatact 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttgtgtttatttatttaagatgctttatgtaatagtagcttggtttttaaaaaaatact 380

                                                                       
Query: 181 gtgtagtattctgttgtgaacatatcacaattcccttttttccattgtacctcttcaaga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtgtagtattctgttgtgaacatatcacaattcccttttttccattgtacctcttcaaga 440

                                                                       
Query: 241 tacgccatgttggttgccctcatattttggatgtcaccaataaggcctctgtgaacacat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tacgccatgttggttgccctcatattttggatgtcaccaataaggcctctgtgaacacat 500

                                                                       
Query: 301 tgtaaatgtcttctgttgcaccatgaccccaccccattcttcattcatagatatatgaat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgtaaatgtcttctgttgcaccatgaccccaccccattcttcattcatagatatatgaat 560

                                                                       
Query: 361 gaagtggcattattgagccacaggacatgggacaaatgacactagtaagtcatgccaagc 420
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 561 gaagtggcattattgagtcacaggacatgggacaaatgacactagtaagtcatgcaaagc 620

                                                                       
Query: 421 agttttccagtgactgaaccactttaatttccatattagccccttcacaacattgtgtga 480
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agtttttcagtgactgaaccactttaatttccatattagccccttcacaacattgtgtga 680

                                                                       
Query: 481 tttgactattgagttgcatgtagctctaggatttatgttttcagtgggtatgttgtgtat 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tttgactattgagttgcatgtagctctaggatttatgttttcagtgggtatgttgtgtat 740

                                                                       
Query: 541 taatatttattcgtgtcaatccattctaatactgaaatgcatgtaggttttgagccagga 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 taatatttattcgtgtcaatccattctaatactgaaatgcatgtaggttttgagccagga 800

                
Query: 601 ttgta 605
           |||||
Sbjct: 801 ttgta 805


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 605
Length of database: 1005
Length adjustment: 10
Effective length of query: 595
Effective length of database: 995
Effective search space:   592025
Effective search space used:   592025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information