Query= MSMg01no080_l23.b1 MSMg01no080_l23.b1 CHROMAT_FILE:
MSMg01no080_l23.b1 PHD_FILE: MSMg01no080_l23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:29:45 2005
(145 letters)
>mm_chr17_86563127_86563671
Length = 545
Score = 273 bits (141), Expect = 4e-78
Identities = 144/145 (99%)
Strand = Plus / Plus
Query: 1 acagacattaacacacccctttaaggttctggcccctccttcctcgctgttgttagcaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acagacattaacacacccctttaaggttctggcccctccttcctcgctgttgttagcaga 260
Query: 61 cctaaacaacatctaagaaggtttcattcttggatagagggcaaatcttcttcagcagcg 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 261 cctaaacaacatctaagaaggtttcattcttggatagagggcaaatcgtcttcagcagcg 320
Query: 121 catccctctggcaccctgttttgag 145
|||||||||||||||||||||||||
Sbjct: 321 catccctctggcaccctgttttgag 345
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 145
Length of database: 545
Length adjustment: 8
Effective length of query: 137
Effective length of database: 537
Effective search space: 73569
Effective search space used: 73569
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no080_l23.g1 MSMg01no080_l23.g1 CHROMAT_FILE:
MSMg01no080_l23.g1 PHD_FILE: MSMg01no080_l23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:29:45 2005
(325 letters)
>mm_chr17_86678269_86678993
Length = 725
Score = 586 bits (303), Expect = e-172
Identities = 319/325 (98%), Gaps = 2/325 (0%)
Strand = Plus / Minus
Query: 1 acttgggaggcatgaagactattgcaagttccagactagcctgggttagattgcaaaaaa 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 acttgggaggcaggaagactattgcaagttccagactagcctgggttagattgcaaaaaa 578
Query: 61 taaaacataaaaataaaaaaataagaaataaaaccacacacacacacacacacaaatgga 120
|||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 577 taaaacataaaaataaaaaaataagaaataaaac--cacacacacacacatacaaatgga 520
Query: 121 acataaaaatccctctaaggaatccatacctggaccttccccgtggtcaccacacaccac 180
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 519 acataaaaatccctctaaggaatctatacctggaccttccccgtggtcaccacacaccac 460
Query: 181 gttaactacaaagccacagaagcctcggtgcctctcctctgaccctcaataaaacataga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 gttaactacaaagccacagaagcctcggtgcctctcctctgaccctcaataaaacataga 400
Query: 241 tataatggctagaggagcagaagtgcccctgccgtgtatctctggttatcaattctgcac 300
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 tataacggctagaggagcagaagtgcccctgccgtgtatctctggttatcaattctgcac 340
Query: 301 ggaacagagttcaatattccaagag 325
|||||||||||||||||||||||||
Sbjct: 339 ggaacagagttcaatattccaagag 315
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 325
Length of database: 725
Length adjustment: 9
Effective length of query: 316
Effective length of database: 716
Effective search space: 226256
Effective search space used: 226256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
