TGCGGCCGCTATACGACTCCTATATTCAGAGAATCCGCGGAATTCATCTA
CCTCTACACCCAGCTATACCACTCCTGAGCATATACTCAAAGGATGTTCC
ATTCTGCCACAAGGACACTTGCTCAACTATGTAGAGCATAATGCATAATA
ATCACAAACTGGAAACCACCTAGATGTCCCTCAACTGAAGAATAATAAAG
AAAACATGGTACATTCACATAGTAGACTATTACTCAGCTGTTAATAAAAT
GGTACCATGAAATTCAGTAAATGGATGGAACTAGAAAAAAAATCTTCCTG
AGTGAGGAAACACAGACTCAGAAAGACAACCATAATATGTACTGATTTAA
AAGTGGACATTAGCTGTTGAGTAAAGGATAATCATTCTCTGGATTCATAA
ACCTAGAGAGAGGTGGGGGGGGGAGAGAACCTGCAAGAATCTCCTTGAGA
ATTAGAAATAGGATAGATTTTGAAGGTGGACTTGAGGACATGTGGGGATA
GAAACAGAAGGGGTCAGGCACAGGTAGAAATGGAAGGAGAGAGTACTGAG
AGGAAAATCTGGAACTGGGGTCATTTGCGGAATGATGTGGAATCTCAATG
CAATGGAATCTCCTTACAAGTGTGACACTAGCAAGATCGCCTTCTAAGGG
AGCATCCAGAACCAAAAACTGCCATCTTCTATAAGCAGGCAAGACTTCCA
GTGCCAAGTCTG

TGTGTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXCACAAAAGGTTTTACTGTAGACCTTTTTCATTCATG
CTGTTGATTGCTAAATGTAATAGTCTGATCTAACACTGAATAAATGTGTC
TTTTTTTTTTACAAAAACAAAACACAACTTTTTGAATTATAGAAAATATT
CTACTCCTAAAACTATTGATACATGCAAAATTTCTCCATGGAAAATATTC
ATAACCTTTTCTTCTGCCTTTTGGAAAGGACAATGTATGTTCTCACAGAA
AGCCACCTTCCTTCATAATCACAAAGTAAGAGGCAGTAGATATGTCAGAC
CTGATTTTAATATTACACAATTCATACACACAATGAACTATCACATTACA
ATGAAATATGTACAATTACTGATTTTTGTACTACCAAAAATAAATTTGTT
AAAAATAAAGAAAAATTAAAAAAATAATATTAATTAATGAAAGTTGAAAA
GTATTATGTCCTTAAATGTAAATACTAAAGTTCAGATTCTAACAAAGAAG
TCCATTTATGCAATTTGAGTCTAAAAAGGATTCCTCGGGAAACCAAATAC
TAAACATAGAACATTTGGTAAGTCGATTTTCATTAAAATTAAGATAATAT
TTTATTTAAAAGACAACATGATAAAAAGTACCAATAATAGATCTTAAAAA
ACTGTTTTAACA

Query= MSMg01no081_g21.g1 MSMg01no081_g21.g1 CHROMAT_FILE:
MSMg01no081_g21.g1 PHD_FILE: MSMg01no081_g21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:30:38 2005
         (612 letters)



>mm_chr17_91525578_91526588
          Length = 1011

 Score = 1152 bits (596), Expect = 0.0
 Identities = 608/612 (99%), Gaps = 1/612 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   caaaaggttttactgtagacctttttcattcatgctgttgattgctaaatgtaatagtct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caaaaggttttactgtagacctttttcattcatgctgttgattgctaaatgtaatagtct 260

                                                                       
Query: 61  gatctaacactgaataaatgtgtcttttttttttacaaaaacaaaacacaactttttgaa 120
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 261 gatctaacactgaataaatgtgtcttttttttt-acaaaaacaaaacacaactttttgaa 319

                                                                       
Query: 121 ttatagaaaatattctactcctaaaactattgatacatgcaaaatttctccatggaaaat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ttatagaaaatattctactcctaaaactattgatacatgcaaaatttctccatggaaaat 379

                                                                       
Query: 181 attcataaccttttcttctgccttttggaaaggacaatgtatgttctcacagaaagccac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 attcataaccttttcttctgccttttggaaaggacaatgtatgttctcacagaaagccac 439

                                                                       
Query: 241 cttccttcataatcacaaagtaagaggcagtagatatgtcagacctgattttaatattac 300
           ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 cttccttcagaagcacaaagtaagaggcagtagatatgtcagacctgattttaatattac 499

                                                                       
Query: 301 acaattcatacacacaatgaactatcacattacaatgaaatatgtacaattactgatttt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 acaattcatacacacaatgaactatcacattacaatgaaatatgtacaattactgatttt 559

                                                                       
Query: 361 tgtactaccaaaaataaatttgttaaaaataaagaaaaattaaaaaaataatattaatta 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tgtactaccaaaaataaatttgttaaaaataaagaaaaattaaaaaaataatattaatta 619

                                                                       
Query: 421 atgaaagttgaaaagtattatgtccttaaatgtaaatactaaagttcagattctaacaaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 atgaaagttgaaaagtattatgtccttaaatgtaaatactaaagttcagattctaacaaa 679

                                                                       
Query: 481 gaagtccatttatgcaatttgagtctaaaaaggattcctcgggaaaccaaatactaaaca 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gaagtccatttatgcaatttgagtctaaaaaggattcctcgggaaaccaaatactaaaca 739

                                                                       
Query: 541 tagaacatttggtaagtcgattttcattaaaattaagataatattttatttaaaagacaa 600
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 740 tagaacatttggtaagtcgatattcattaaaattaagataatattttatttaaaagacaa 799

                       
Query: 601 catgataaaaag 612
           ||||||||||||
Sbjct: 800 catgataaaaag 811


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 612
Length of database: 1011
Length adjustment: 10
Effective length of query: 602
Effective length of database: 1001
Effective search space:   602602
Effective search space used:   602602
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)