Query= MSMg01no083_b08.b1 MSMg01no083_b08.b1 CHROMAT_FILE:
MSMg01no083_b08.b1 PHD_FILE: MSMg01no083_b08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:32:42 2005
(312 letters)
>mm_chr17_14596304_14597016
Length = 713
Score = 551 bits (285), Expect = e-161
Identities = 303/309 (98%), Gaps = 1/309 (0%)
Strand = Plus / Plus
Query: 5 gaattctttcatggagttctgctggaaaacagg-agagagtctgccctcaataagtatgg 63
||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 205 gaattctttcatgtagttctgctggaaaacaggcagagagtctgccctcaataagtatgg 264
Query: 64 gcactggcccttgcttacagctgtgaaccattgccactacccagagttcccagtgcaacc 123
||||||||||||| || |||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 265 gcactggcccttgtttgcagctgtgaaccattgccgctacccagagttcccagtgcaacc 324
Query: 124 tctctcatacagtcctttcaagggggaatcatgtgggcagcatcatggtctatctctagg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tctctcatacagtcctttcaagggggaatcatgtgggcagcatcatggtctatctctagg 384
Query: 184 gtctgtttctatcaggagcttcagaccaccctgaagggctgaagatgcggtggcattcgg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gtctgtttctatcaggagcttcagaccaccctgaagggctgaagatgcggtggcattcgg 444
Query: 244 tatttggaagctagaaggccatcccagtaggagaaaaccctcaagacccattcagatcca 303
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gatttggaagctagaaggccatcccagtaggagaaaaccctcaagacccattcagatcca 504
Query: 304 catccttgt 312
|||||||||
Sbjct: 505 catccttgt 513
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 312
Length of database: 713
Length adjustment: 9
Effective length of query: 303
Effective length of database: 704
Effective search space: 213312
Effective search space used: 213312
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no083_b08.g1 MSMg01no083_b08.g1 CHROMAT_FILE:
MSMg01no083_b08.g1 PHD_FILE: MSMg01no083_b08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:32:43 2005
(291 letters)
>mm_chr17_14726744_14727434
Length = 691
Score = 540 bits (279), Expect = e-158
Identities = 288/291 (98%)
Strand = Plus / Minus
Query: 1 aagggagccagagttaaagaaaccgtagtccgttgagggctggggtgcagtgtgtgggag 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 379 aagggagccagagttaaagaaaccgtagtccattgagggctggggtgcagtgtgtgggag 320
Query: 61 attacctgcctggctgttcatggcaccaggctcaacccacagcaccacaacacgggaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 attacctgcctggctgttcatggcaccaggctcaacccacagcaccacaacacgggaaga 260
Query: 121 attatgtcatatagtacccgattgctaatccacacaaaggccacaaagtgaggcgagcat 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 attatgtcatatagtacccgattgctaatccacacaaaggccacaaagtgaggcgagcac 200
Query: 181 gaggatagctcagttgctcaagtgcctggtacataaacacgagggtctgggtttacattc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 gaggatagctcagttgctcaagtgcctggtacataaacacgagggtctgggtttacattc 140
Query: 241 ccagcacataaaacgtcaagactggcagcttgtgtcgaatcccagatctga 291
|||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 ccagaacataaaacgtcaagactggcagcttgtgtcgaatcccagatctga 89
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
