Query= MSMg01no088_c21.b1 MSMg01no088_c21.b1 CHROMAT_FILE:
MSMg01no088_c21.b1 PHD_FILE: MSMg01no088_c21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:40:34 2005
(212 letters)
>mm_chr11_32336772_32337383
Length = 612
Score = 379 bits (196), Expect = e-110
Identities = 208/212 (98%)
Strand = Plus / Minus
Query: 1 taatcagataattttaattacaatcaaaatcattttaaccataaacttcactgaatactt 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 412 taatcagataattttaattacaatcaaaatcattttaaccataaacttcattgaatactt 353
Query: 61 atctctcaacccaggaaaggtgagttaggtgtgcctgtcctgtttgcctgtcacttgcag 120
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 352 atctctcaacccagaaaaggtgagttaggtgtgcctgtcctgtttgcctgtcacttggag 293
Query: 121 agtctgaaatatatgtgttgtcccctgctacacggctgacttccagagagccgcttccct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 agtctgaaatatatgtgttgtcccctgctacacggctgacttccagagagccgcttccct 233
Query: 181 cggactgattccttaccacatctgtcttctgg 212
||| ||||||||||||||||||||||||||||
Sbjct: 232 cggcctgattccttaccacatctgtcttctgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 212
Length of database: 612
Length adjustment: 9
Effective length of query: 203
Effective length of database: 603
Effective search space: 122409
Effective search space used: 122409
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no088_c21.g1 MSMg01no088_c21.g1 CHROMAT_FILE:
MSMg01no088_c21.g1 PHD_FILE: MSMg01no088_c21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:40:34 2005
(185 letters)
>mm_chr17_26437698_26438283
Length = 586
Score = 188 bits (97), Expect = 2e-52
Identities = 166/189 (87%), Gaps = 7/189 (3%)
Strand = Plus / Minus
Query: 1 agtactgc-tccatgtcttgtttttatggcttattcaccaaatttactaaataggattaa 59
|||||||| ||| | ||||||| |||||||||||| ||| ||||||| ||||| ||||||
Sbjct: 386 agtactgcttcc-tctcttgttcttatggcttatttacccaatttacaaaataagattaa 328
Query: 60 ctgatgttcctaacacacagtgg-ggactagtaagcactacattcacccaaagtcaccaa 118
|||||||||||||||||| ||| ||| | ||||||||||||||||||||||||||||||
Sbjct: 327 ctgatgttcctaacacaccctggaggagtggtaagcactacattcacccaaagtcaccaa 268
Query: 119 gagtccgaactcatctacagatac-agttctatgtcgacagcacaaacttcga-tgtaga 176
|| || |||||||||||||||| | | ||| ||||||||||| |||||||| | | ||||
Sbjct: 267 gattcagaactcatctacagat-ctatttcaatgtcgacagcgcaaacttcaact-taga 210
Query: 177 tactcacat 185
|||||||||
Sbjct: 209 tactcacat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 185
Length of database: 586
Length adjustment: 8
Effective length of query: 177
Effective length of database: 578
Effective search space: 102306
Effective search space used: 102306
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
