Query= MSMg01no091_c16.b1 MSMg01no091_c16.b1 CHROMAT_FILE:
MSMg01no091_c16.b1 PHD_FILE: MSMg01no091_c16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:44:34 2005
(189 letters)
>mm_chr17_68353905_68354493
Length = 589
Score = 366 bits (189), Expect = e-106
Identities = 189/189 (100%)
Strand = Plus / Plus
Query: 1 aacgccagactcttacctcattcctaacatccctttcctccactcagttgtggtccctga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aacgccagactcttacctcattcctaacatccctttcctccactcagttgtggtccctga 260
Query: 61 cagatactgtttccagactgtctgaaaagtactccttattgccacgggctccatgaatgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagatactgtttccagactgtctgaaaagtactccttattgccacgggctccatgaatgc 320
Query: 121 tattttcagggggctttttaagggagaagattataaacacacatgcacacacacacacac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tattttcagggggctttttaagggagaagattataaacacacatgcacacacacacacac 380
Query: 181 acacacaca 189
|||||||||
Sbjct: 381 acacacaca 389
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 189
Length of database: 589
Length adjustment: 8
Effective length of query: 181
Effective length of database: 581
Effective search space: 105161
Effective search space used: 105161
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no091_c16.g1 MSMg01no091_c16.g1 CHROMAT_FILE:
MSMg01no091_c16.g1 PHD_FILE: MSMg01no091_c16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:44:35 2005
(303 letters)
>mm_chr17_68431504_68432206
Length = 703
Score = 534 bits (276), Expect = e-156
Identities = 297/304 (97%), Gaps = 1/304 (0%)
Strand = Plus / Minus
Query: 1 gtct-cccccctttaaattcagaccctagaattaaaacattgagccttgatcagagaact 59
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 gtctccccccctttaaattcagaccctagaattaaaacattgagccttgatcagagaact 596
Query: 60 ttgttttggctcattatttctctcaccatccttcctatcgatcctcagatttcctttcag 119
||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 595 ttgttttggctcattatttctctcaccatccttcctacccatcctcagatttcctttcag 536
Query: 120 gaaccagtaacccatggccactagcggctacagacccttagatggactaagccctcttcc 179
|||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 535 gaaccaataacccatggccactggcggctacagacccttagatggactaagccctcttcc 476
Query: 180 ttatctcagcatttatttcataggaacaacaataagtcacatcattatgttccttcactt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 ttatctcagcatttatttcataggaacaacaataagtcacatcattatgttccttcactt 416
Query: 240 accatgcccaaaaggcattccatattatttagaaataaacatacaaaaacaaaagcaaaa 299
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 aaaatgcccaaaaggcattccatattatttagaaataaacatacaaaaacaaaagcaaaa 356
Query: 300 caga 303
||||
Sbjct: 355 caga 352
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 303
Length of database: 703
Length adjustment: 9
Effective length of query: 294
Effective length of database: 694
Effective search space: 204036
Effective search space used: 204036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
