Query= MSMg01no091_m15.b1 MSMg01no091_m15.b1 CHROMAT_FILE:
MSMg01no091_m15.b1 PHD_FILE: MSMg01no091_m15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:45:25 2005
(416 letters)
>mm_chr17_49491818_49492633
Length = 816
Score = 706 bits (365), Expect = 0.0
Identities = 404/417 (96%), Gaps = 1/417 (0%)
Strand = Plus / Plus
Query: 1 taacacatgtgagctatcctgaggacgggaggtgctaactggcaatagatgccaagaaat 60
|||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||
Sbjct: 200 taacacatgtgagctatcctgaggacgggaggtgttaactggcaatagatgttaagaaat 259
Query: 61 caacagcttcaggcaggagagactgtccagcattaagagatcttgcaaaggaccc-agtt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 260 caacagcttcaggcaggagagactgtccagcattaagagatcttgcaaaggacccaagtt 319
Query: 120 gtctccaagtagccatatcgggaggcttctacgtccacgccttccctgccatgttggctg 179
||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 320 gtctccaagtacccatatcgggaggcttctacctccacgctttccctgccatgttggctg 379
Query: 180 atccttttgtgaaccctaaggcaggatatatgctacatcctctagttgtttcttgtcaag 239
|| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 380 attcttttgtgaaccctaaggcagaatatatgctacatcctctagttgtttcttgtcaag 439
Query: 240 aagttttgttaatgcaaaataaaaagtatctacctccagtaacgtcacacttcagtctgc 299
|||||||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 440 aagttttgttaaggcaaaataaaaagtatctacccccagtaacgtcacacttaagtctgc 499
Query: 300 atttgacagttaagaatgcctttaaaatttccttatgatttctatggctgattttatgcc 359
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 500 atttgacagttaagaatgcctttaaattttccttatgatttctatggctgattttatgcc 559
Query: 360 aagagtaaagctaggttatgtccacctcctccaaggatcttaatgatctttgaaatc 416
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 aagagtaaagctaggttatgtccacctcctccaaggatcttaatgatctttgaaatc 616
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 416
Length of database: 816
Length adjustment: 9
Effective length of query: 407
Effective length of database: 807
Effective search space: 328449
Effective search space used: 328449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no091_m15.g1 MSMg01no091_m15.g1 CHROMAT_FILE:
MSMg01no091_m15.g1 PHD_FILE: MSMg01no091_m15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:45:25 2005
(226 letters)
>mm_chr17_49678234_49678861
Length = 628
Score = 406 bits (210), Expect = e-118
Identities = 223/228 (97%), Gaps = 2/228 (0%)
Strand = Plus / Minus
Query: 1 aactctgggaagcagccgtgatccaggccaggaaaataagtgaggacttcagagccagaa 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 428 aactctgggaagcagccgtgatccaggccaggaaaataagtgcggacttcagagccagaa 369
Query: 61 ggaagtggattggctcctcctgaagccccctctccagctgcccaa--ccccccctctaac 118
||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||
Sbjct: 368 ggaagtggattggctcctcctgaagccccttctccagctgcccaaccccccccctctaac 309
Query: 119 cacagatgagagctagccttcccgggtcgtctgagggcactaaccaacccggtggcattt 178
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 cacagatgagagttagccttcccgggtcgtctgagggcactaaccaacccggtggcattt 249
Query: 179 tcttctgaaacggagcagcatctcatagaactgttgagtgcctgggag 226
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 tcttctgaaacggagcagcatctcatagaactgttgagtgcctgggag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 226
Length of database: 628
Length adjustment: 9
Effective length of query: 217
Effective length of database: 619
Effective search space: 134323
Effective search space used: 134323
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
