Query= MSMg01no091_n20.b1 MSMg01no091_n20.b1 CHROMAT_FILE:
MSMg01no091_n20.b1 PHD_FILE: MSMg01no091_n20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:45:31 2005
(293 letters)
>mm_chr17_30929626_30930319
Length = 694
Score = 553 bits (286), Expect = e-162
Identities = 292/294 (99%), Gaps = 1/294 (0%)
Strand = Plus / Plus
Query: 1 ctttttctttccctatgagattacaa-gttgaaattttctttgcagaaaaaggacccaag 59
|||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||
Sbjct: 201 ctttttctttccctatgagattacaaagttgaaattttctttgcagaaaaaggagccaag 260
Query: 60 aaagcaatcttggtttctgtggattcacgcacactttggcatcaccagtaaaagtattta 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaagcaatcttggtttctgtggattcacgcacactttggcatcaccagtaaaagtattta 320
Query: 120 gttgacaggagctggaaagaaggctcagcagttgagagcatagctatgctgctctttcag 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gttgacaggagctggaaagaaggctcagcagttgagagcatagctatgctgctctttcag 380
Query: 180 gagacctggcttcagctcccaggatccacatggcagctcacaaccatctgtaactccagt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gagacctggcttcagctcccaggatccacatggcagctcacaaccatctgtaactccagt 440
Query: 240 accaggggatctgatctctatgttgaccagacatacatgtggcaaacacataca 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 accaggggatctgatctctatgttgaccagacatacatgtggcaaacacataca 494
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 694
Length adjustment: 9
Effective length of query: 284
Effective length of database: 685
Effective search space: 194540
Effective search space used: 194540
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no091_n20.g1 MSMg01no091_n20.g1 CHROMAT_FILE:
MSMg01no091_n20.g1 PHD_FILE: MSMg01no091_n20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:45:31 2005
(285 letters)
>mm_chr17_30658550_30659234
Length = 685
Score = 505 bits (261), Expect = e-147
Identities = 280/287 (97%), Gaps = 2/287 (0%)
Strand = Plus / Minus
Query: 1 tagtaa--tctgaggttccttctgagtggagtggttgaggcgctcagttctgccatgatg 58
|||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 493 tagtaatctctgaggttccttctgagtggagtggttgaggcgctcagttctggaatgatg 434
Query: 59 tatttactgtgatcattgctcacagtgttcaattctttgtttgtttaggaggaattcagg 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 tatttactgtgatcattgctcacagtgttcaattctttgtttgtttaggaggaattcagg 374
Query: 119 cagggatcaaggaacagattatgaaagtgtttggcaatcattgagggatggttgactagg 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 cagggatcaaggaacagattatgaaagtgtttggcaatcattgagggatggttgactagg 314
Query: 179 agggggggtcttatgactcttacggtatttaagtagtaaaattaataataaaaatgctga 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 agggggggtcttatgactcttacggtatttaagtagtaaaattaataataaaaatgctga 254
Query: 239 ggaagcacagtccattcttagcagttccttaagagacgtcatcaaac 285
|||||||| |||||||| ||||||||||||||||||| |||||||||
Sbjct: 253 ggaagcacggtccattcctagcagttccttaagagacatcatcaaac 207
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space: 186576
Effective search space used: 186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
