Query= MSMg01no092_c17.b1 MSMg01no092_c17.b1 CHROMAT_FILE:
MSMg01no092_c17.b1 PHD_FILE: MSMg01no092_c17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:45:56 2005
(184 letters)
>mm_chr17_21849054_21849639
Length = 586
Score = 311 bits (161), Expect = 1e-89
Identities = 173/177 (97%), Gaps = 2/177 (1%)
Strand = Plus / Plus
Query: 10 gaattctttttcctc-atgaaggg-taacttgctttttgacttcctatatcaacccctgt 67
||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 210 gaattctttttcctccatgaaggggtaacttgctttttgacttcctatatcaacccctgt 269
Query: 68 aagtttttctctttctccagctggataactgttgatacactgttgacttgctgtgggaga 127
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 aagtttttctctttcttcagctggataactgttgatacactgttgacttgctgtgggaga 329
Query: 128 aatggacacctttgtctcgttccctattagagaggaatgattcccgttttcctcaat 184
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 330 aatggacacctttgtctcgttccctattagagaggaatgattccagttttcctcaat 386
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 184
Length of database: 586
Length adjustment: 8
Effective length of query: 176
Effective length of database: 578
Effective search space: 101728
Effective search space used: 101728
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no092_c17.g1 MSMg01no092_c17.g1 CHROMAT_FILE:
MSMg01no092_c17.g1 PHD_FILE: MSMg01no092_c17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:45:56 2005
(287 letters)
>mm_chr17_21910677_21911363
Length = 687
Score = 538 bits (278), Expect = e-157
Identities = 284/286 (99%)
Strand = Plus / Minus
Query: 1 actatgtagaccaggctggccttgaactcacaaagatctgcctgcctctgcctcccaagt 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 581 actatgtagaccaggctggccttgaactcacaaagatctgcctgcctctgtctcccaagt 522
Query: 61 gctgggattaaaagtgtttgccaccaccactcagcaagaaatataattctcaacttaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 gctgggattaaaagtgtttgccaccaccactcagcaagaaatataattctcaacttaaaa 462
Query: 121 aattataaatattccatgagaaagctcagatctaataatccttgaaataagccataaaac 180
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 461 aattataaatattccatgagaaagctcagatctaataatccgtgaaataagccataaaac 402
Query: 181 tatgttgttttacatatcaacaagatgacagtgaaaatacagcagacttctaagacctcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 tatgttgttttacatatcaacaagatgacagtgaaaatacagcagacttctaagacctcc 342
Query: 241 ataatatctaggaaatatctcagataccctgatgatagccttcata 286
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 ataatatctaggaaatatctcagataccctgatgatagccttcata 296
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
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