CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTTGTCTTCTTAAATAGGGAGGAGGAGGAGGAAGAGGAAGAGGAGGA
GGAGGAGGAGGCTGTTTTCCCCCCTTTTCNTTTTNTNCTNACTATTCTCC
CCTCACTTTCGCANATACGCCTCTTCACTAATTCCGATTTTTCCCTATAC
CTTTTTAATTGTTATCCTTTCCGTTTTTCTTAGGGTGATCANGCCCCATC
TGTTGTTTTTCTTTCTTTGTGTTACTTTTTTATATCCAGAGGCTGTTTTC
TGCCAAACGCGTGAGCGATTCATAACGGAACCCGCTCGTTTTTTTTTTCT
GTGTGAATTTAAGAGCAATGACAATCAGTGTATTATTTTTTTTCCCCCCC
CTCCCCCCTCCGTTTTTTTCTTTCCTCTAGTACCGACGGCCCCCCCCATT
TTTCACCTCCATACGCCCCATATTACACCCGCCCTCCGGAGGGGGGCCTC
CTCTCCGGTTTTTTTTCGCCCCCACACACCACCCCCTCCGCGCTTAACAC
CCTTATTTTACTATATCACTATATTCCCCGCTCTACTTAACCTCCAGCCA
CGCCTTCATTTTATACCCGCCCCTATGTTGTACCCTACCCGCCATTTCCC
CCAATTAGTGAAGGTCCAATATTCACCCCTAACCCCTACCCCCGCCCCCA
CCCTATTTCCTCCACCGCCCATCTGAATCGCTTGTTATTAAGTAGCTATT
CACCGGCGCGCACNCGCGTCGACGCAGATATAATCATTTTTTTCCGACCT
TATTCCGCCTTCGCCCTTTCCCGCGCATTCTCTAGN

CGATGTAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTAAGGACTGGGAACCAACCTTCCAAAA
GAGCACAACACTACTCTGGCCTAAGGAAAATCCACAATAAAATAAGGTAA
ACCCAGAGTCAGGTTAGGTCATTTAGATTTTAACCCTGGCTCTCTGCTCA
TTGAAATATGACCTTGAGCTTGGCACCACCCCCCTCCCAGCACTGTCCTC
CCTTGTGATTCATAGTGCTAGAATAATAATAGTCATTTCGTATCTGACCA
TGAGATAGAAGGACTCAGGATGAATGGAAAGTATTATGTGTACTGACTGG
AATCCAAGCTTCAGATGGAATGCAGGGGACATTTCTTTTTCTTCTCATCC
AAGTTGAATCCTTGAATGGTAGAGAGACTCTCAAGTAATTGACATTCTTC
CCTTTCCTATATCACTGTTCAGTGTCTTAAAGGCTCCGCTTAAGAAGTGG
GATCCCTGAGTAATTCAAGACATTAAGGCAGCCTTTGATCCAGAGGCAGT
CTCTGGGAATTGGCATTTAGGAAAGGTCTGCTATGGGCCGTGTGGGACTT
CACACTATTCTAGCCTCTGCCTTGGCCTGAATTGCACGGTTTCCAATAGT
CAAATGCTTCCACAAAGCAAGATTTCCACCAGTGAAAATCATGTGCTT

Query= MSMg01no095_m03.g1 MSMg01no095_m03.g1 CHROMAT_FILE:
MSMg01no095_m03.g1 PHD_FILE: MSMg01no095_m03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:53 2005
         (625 letters)



>mm_chr17_44356318_44357342
          Length = 1025

 Score = 1106 bits (572), Expect = 0.0
 Identities = 617/644 (95%), Gaps = 19/644 (2%)
 Strand = Plus / Minus

                                                                        
Query: 1    taaggactgggaaccaaccttccaaaagagcacaacactactctggcctaaggaaaatcc 60
            |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||
Sbjct: 1003 taaggactgggaaccaaccttccaaaagagcacaacactattctgacctaaggaaaatcc 944

                                                                        
Query: 61   acaataaaataaggtaaacccagagtcaggttaggtcatttagattttaaccctggctct 120
            |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 943  acaataaaataaggtaaagccagagtcaggttaggtcatttagattttaaccctggctct 884

                                                                        
Query: 121  ctgctcattgaaatatgaccttgagcttggcaccacccc-------------------cc 161
            ||||||||||||||||||||||||||||| |||| ||||                   ||
Sbjct: 883  ctgctcattgaaatatgaccttgagcttgccaccgccccccccccccccacacacacacc 824

                                                                        
Query: 162  tcccagcactgtcctcccttgtgattcatagtgctagaataataatagtcatttcgtatc 221
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 823  tcccagcactgtcctcccttgtgattcatagtgctagaataataatagtcatttcgtatc 764

                                                                        
Query: 222  tgaccatgagatagaaggactcaggatgaatggaaagtattatgtgtactgactggaatc 281
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763  tgaccatgagatagaaggactcaggatgaatggaaagtattatgtgtactgactggaatc 704

                                                                        
Query: 282  caagcttcagatggaatgcaggggacatttctttttcttctcatccaagttgaatccttg 341
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703  caagcttcagatggaatgcaggggacatttctttttcttctcatccaagttgaatccttg 644

                                                                        
Query: 342  aatggtagagagactctcaagtaattgacattcttccctttcctatatcactgttcagtg 401
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643  aatggtagagagactctcaagtaattgacattcttccctttcctatatcactgttcagtg 584

                                                                        
Query: 402  tcttaaaggctccgcttaagaagtgggatccctgagtaattcaagacattaaggcagcct 461
            |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 583  tcttaaaggctccgcttaagaagtggtatccctgagtaattcaagacattaaggcagcct 524

                                                                        
Query: 462  ttgatccagaggcagtctctgggaattggcatttaggaaaggtctgctatgggccgtgtg 521
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523  ttgatccagaggcagtctctgggaattggcatttaggaaaggtctgctatgggccgtgtg 464

                                                                        
Query: 522  ggacttcacactattctagcctctgccttggcctgaattgcacggtttccaatagtcaaa 581
            ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 463  ggactacacactattctagcctctgccttggcctgaattgcatggtttccaatagtcaaa 404

                                                        
Query: 582  tgcttccacaaagcaagatttccaccagtgaaaatcatgtgctt 625
            ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403  tgcttccacaaagcaagatttccaccagtgaaaatcatgtgctt 360


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1025
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1015
Effective search space:   624225
Effective search space used:   624225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)