Query= MSMg01no096_j07.b1 MSMg01no096_j07.b1 CHROMAT_FILE:
MSMg01no096_j07.b1 PHD_FILE: MSMg01no096_j07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:52:59 2005
(368 letters)
>mm_chr17_41281789_41282556
Length = 768
Score = 648 bits (335), Expect = 0.0
Identities = 357/369 (96%), Gaps = 9/369 (2%)
Strand = Plus / Minus
Query: 5 gaattcacattgatttgca-----taaagctggttaaaagaggtcatagtaacactcaga 59
|||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 588 gaattcacattgat----aaagagtaaagctggttaaaagaggtcatagtaacactcaga 533
Query: 60 ataatacgtaattctgtctggaaaaggaaacaataaaacttaccaatttaattgaagaat 119
||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 532 ataatacgtaactctgtctggaaaaggaaacaataaaacttaacaatttaattgaagaat 473
Query: 120 tcccatgactttccatattgaaaaaataaatgtccatggaactctgttttatcatcagat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 tcccatgactttccatattgaaaaaataaatgtccatggaactctgttttatcatcagat 413
Query: 180 tgtaaagaacaatagtaaatgcatatgtgtatttgcaaatgggggtgtagattatggtac 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 tgtaaagaacaatagtaaatgcatatgtgtatttgcaaatgggggtgtagattatggtac 353
Query: 240 atagatatttctgtgtttacatgcatgtgactatatgcaattattttaacatggaagagg 299
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 352 atagatatttctgtgtttacatgcatgtgtctatatgcaattattttaacatggaagagg 293
Query: 300 aaataaaattatattaaaaaccttgagaatggcctggatatataagaggaggagatgaaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 aaataaaattatattaaaaaccttgagaatggcctggatatataagaggaggagatgaaa 233
Query: 360 ttaattaga 368
|||||||||
Sbjct: 232 ttaattaga 224
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 368
Length of database: 768
Length adjustment: 9
Effective length of query: 359
Effective length of database: 759
Effective search space: 272481
Effective search space used: 272481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no096_j07.g1 MSMg01no096_j07.g1 CHROMAT_FILE:
MSMg01no096_j07.g1 PHD_FILE: MSMg01no096_j07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:52:59 2005
(257 letters)
>mm_chr17_41128757_41129413
Length = 657
Score = 464 bits (240), Expect = e-135
Identities = 252/256 (98%)
Strand = Plus / Plus
Query: 1 ttctgttatcagggaatttccattatcagggactgcttcaaaagagggggagggaagctg 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 201 ttctgttatcagggaatttccattatcagggactgcttcaaaaaagggggagggaagctg 260
Query: 61 aataaaatactggggttgaatgttgtgatattttcagttgacatgaaagggagagggagg 120
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aataaaatactggggtagaatgttgtgatattttcagttgacatgaaagggagagggagg 320
Query: 121 caaaggaagagctggaatagaggaaggacacgtgacatttgcctggattgcactggccat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caaaggaagagctggaatagaggaaggacacgtgacatttgcctggattgcactggccat 380
Query: 181 ttaacctttaaccatcacattcattccaaggataatgagttatgattcccacatacaatg 240
||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||
Sbjct: 381 ttaacctttaaccatcacagtcattccaaggagaatgagttatgattcccacatacaatg 440
Query: 241 agaaacgaggctcagc 256
||||||||||||||||
Sbjct: 441 agaaacgaggctcagc 456
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 257
Length of database: 657
Length adjustment: 9
Effective length of query: 248
Effective length of database: 648
Effective search space: 160704
Effective search space used: 160704
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
