Query= MSMg01no098_g08.b1 MSMg01no098_g08.b1 CHROMAT_FILE:
MSMg01no098_g08.b1 PHD_FILE: MSMg01no098_g08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:55:29 2005
(450 letters)
>mm_chr17_71469243_71470092
Length = 850
Score = 638 bits (330), Expect = 0.0
Identities = 364/378 (96%), Gaps = 6/378 (1%)
Strand = Plus / Minus
Query: 75 aaagaaagaaa--gaaagaaagaaagaaagaaagaaagaaagaaagaaagacagaaagaa 132
||||||| ||| || |||||||||||||||||||||||||||||| |||| ||||||||
Sbjct: 738 aaagaaaaaaatggagagaaagaaagaaagaaagaaagaaagaaaggaagaaagaaagaa 679
Query: 133 agaaagaaagaaaggaagaaaggaagaaagttagttagttagttaaaactttatcagtca 192
|| ||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 678 aggaaggaaggaaggaagaaaggaagaa----agttagttagttaaaactttatcagtca 623
Query: 193 gaattgataacacaaagttaaagtcacaaggttaggtcactgaccacctttccatgagac 252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 gaattgataacacaaagttaaagtcacaaggttaggtcactgaccacctttccatgagac 563
Query: 253 tgcctatggcttcacataaagctctcaacaagacagataaggactttctgtgtagggagt 312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 tgcctatggcttcacataaagctctcaacaagacagataaggactttctgtgtagggagt 503
Query: 313 ataaagtagtaggttttagatgttttcatttcagcaaggagccttcaaccttaaacaaaa 372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 ataaagtagtaggttttagatgttttcatttcagcaaggagccttcaaccttaaacaaaa 443
Query: 373 aagttagctaacagtcccagtaaaagtctttcaaacaaaggtgtgttatctaaacatcct 432
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 442 aagttagctaacagtcccagtaaaagtctttcaaacaaaggtgtgttgtctaaacatcct 383
Query: 433 tgcaaggaaaaaaaaaaa 450
||||||||||||||||||
Sbjct: 382 tgcaaggaaaaaaaaaaa 365
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 71
Number of extensions: 18
Number of successful extensions: 17
Number of sequences better than 10.0: 1
Number of HSP's gapped: 16
Number of HSP's successfully gapped: 1
Length of query: 450
Length of database: 850
Length adjustment: 10
Effective length of query: 440
Effective length of database: 840
Effective search space: 369600
Effective search space used: 369600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no098_g08.g1 MSMg01no098_g08.g1 CHROMAT_FILE:
MSMg01no098_g08.g1 PHD_FILE: MSMg01no098_g08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:55:30 2005
(346 letters)
>mm_chr17_71307961_71308706
Length = 746
Score = 596 bits (308), Expect = e-175
Identities = 335/344 (97%)
Strand = Plus / Plus
Query: 1 aattccatcttcagaacccacatggaaggaaacaggaggagagaactgacctctgacctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aattccatcttcagaacccacatggaaggaaacaggaggagagaactgacctctgacctt 260
Query: 61 cccacatgagccatggcacatgactgaaagcaagtaaataactaagtagtttaaaataat 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 261 cccacatgagccatggcacatgactgaaagcaagtaaataactaagtaatttaaaataat 320
Query: 121 aataaaaagtgctaagatatttcctgacacatatttttctgacaaaaatctctgcctacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aataaaaagtgctaagatatttcctgacacatatttttctgacaaaaatctctgcctacc 380
Query: 181 tctatatatccaaaagttggatggaaacacacacacatgcacaaaactactcaagtgtac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctatatatccaaaagttggatggaaacacacacacatgcacaaaactactcaagtgtac 440
Query: 241 agccactgccttatacagatgcacatgaaactaagcaaccgtgtcagtgacatttcacgc 300
|||||| ||| || || ||||||||||||||||| ||||||||||||||||||||| ||
Sbjct: 441 agccaccgccacatgcacatgcacatgaaactaagtaaccgtgtcagtgacatttcaggc 500
Query: 301 tgttacccaccagtggttggtaagggtaccaggaaacagtcatg 344
|||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 501 tgttacccaccagtagttggtaagggtaccaggaaacagtcatg 544
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 346
Length of database: 746
Length adjustment: 9
Effective length of query: 337
Effective length of database: 737
Effective search space: 248369
Effective search space used: 248369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
