CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCAAGAGGATCCGCGGAA
TTCAATTATGTACCATGCCTTTTGTTGAAAGTTCTCACTATGATATAAGG
GCAGGAGAAGAATTACATTTTAAATAAAGTTGAGTGTGAAGACCAACAGT
CAAAGTTATCCTTTATCCTTTATAGTATGCAAATTCAGCCTCAATTCAAG
AGATAAATAAACCATACCATGCTTTGTAGCAATCAGATAGTTTTTTTTTA
TAGAATTGCTGATATAATGTTTGTTTCATATGGATGAAAATATTTTACAT
ATTCTCAGCAATTTTTAAAATATCTTCATTTTAATGTATATTATACTGAA
ATTCATTAAAATACTTCCAACATAAAATAAAATTTATATACAAAGGAAGA
TGGCATAAGAAGCAGAAAATTATTATTACATTGTCTCTTATGAAAACCCA
TCTTTAGCATTAAGTCAGTTTCTATCATTTTGAGTTTTACGGATATAGGT
TGGAGGTGATAATATTGGTTTAGATGCAATGAAATAACTTTTAAAGATGT
GTAGTAGGTGTATTCTTTCTATAAATAATTCTTTAGTGCGTTGGTTCTTT
ATGTTCAAGAACACTATAATAGTCCATGTTCTTGGGATTATCAAAGAGAA
AAGAATTATAGTTAGACATTAGCCAATTGACATATATAAGATCTATGAAG
G

TGGGTGTGTTTTTTTTTTTGCTGTGNGCTNCCCCCCCTTTCTCCCTTTAN
TCCNCTTTCGATGATACGGGTAGCCTGGNGGNCGCCTGTTTCCCAGCTGC
AGGNGAACNANAGAAGTTCCAACACAATCCGNCCNAGNAAGCAGGAANNA
AGNCCAANAACACAGCNAACGGNCACCCCCAGGANANAAGGGCCACNACG
GCNNCANCAGACACGCGCCGCNCAACCAGNCACCGGGGACGGAAGGCCCA
CAAACGAGAAGAAACGCAGAAAGACACCCNCACAGGCAGCCGGCACAGCA
CCATCTGATATNGNGNGAGACAGCACACAGGGAACAAGCCCCCGAGCGAG
CACAAANACAGCCCGAGCGTTTTTTTTTTTACCNCCAAAGCGCGCNGNCN
ACAGCAAAAGATCCTGTCTCCCCCCCCTCCAAGGAAACCAAGGGCAATGT
AATATGTTATACCAATTTATACACACTGTATTTTATTTTGAGACCGAGTC
TTACTATGAAAGTCGTTATTTGCCCTGGACCTTGCTATTGAAAACAATTT
GACCATAAACTTCTCAAGGAATTTTCCTGTCCTTGGCCTTTTAAAGGGCC
AAAATCAAAATTGCCAAACACCCAAACTGTGAAAAAAAAACCCCTTTGGG
CCTTGTCCTGGCCATTTTAAAACCCTTAAACACCCCTGCCTTTTAATCCC
CCCTCATTAAACAAAAGACAATTCTTTATCCTTTTTTAATCTCCCAAAAA
AAACCCATGTTTTTTATTTCTAGAAAC

Query= MSMg01no100_e24.b1 MSMg01no100_e24.b1 CHROMAT_FILE:
MSMg01no100_e24.b1 PHD_FILE: MSMg01no100_e24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:58:08 2005
         (599 letters)



>mm_chr17_38554780_38555774
          Length = 995

 Score = 1075 bits (556), Expect = 0.0
 Identities = 582/592 (98%), Gaps = 4/592 (0%)
 Strand = Plus / Minus

                                                                       
Query: 8   gaattcaattatgtaccatgccttttgttgaaagttctcactatgatataagggcaggag 67
           ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 gaattcaattatgaagcatgccttttgttgaaagttctcactatgatataagggcaggag 736

                                                                       
Query: 68  aagaattacattttaaataaagttgagtgtgaagaccaacagtcaaagttatcctttatc 127
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 aacaattacattttaaataaagttgagtgtgaagaccaacagtcaaagttatcctttatc 676

                                                                       
Query: 128 ctttatagtatgcaaattcagcctcaattcaagagataaataaaccataccatgctttgt 187
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 ctttatagtatgcaaatttagcctcaattcaagagataaataaaccataccatgctttgt 616

                                                                       
Query: 188 agcaatcagatagtttttttttatagaattgctgatataatgtttgtttcatatggatga 247
           |||||||||   | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 agcaatcag---g-ttttttttatagaattgctgatataatgtttgtttcatatggatga 560

                                                                       
Query: 248 aaatattttacatattctcagcaatttttaaaatatcttcattttaatgtatattatact 307
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 559 aaatattttacatattctcaacaatttttaaaatatcttcattttaatgtatattatact 500

                                                                       
Query: 308 gaaattcattaaaatacttccaacataaaataaaatttatatacaaaggaagatggcata 367
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 499 gaaattcattaaaatacttccaacataaaataaaatttatatacaaaggaagacggcata 440

                                                                       
Query: 368 agaagcagaaaattattattacattgtctcttatgaaaacccatctttagcattaagtca 427
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 agaagcagaaaattattattacattgtctcttatgaaaacccatctttagcattaagtca 380

                                                                       
Query: 428 gtttctatcattttgagttttacggatataggttggaggtgataatattggtttagatgc 487
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gtttctatcattttgagttttacggatataggttggaggtgataatattggtttagatgc 320

                                                                       
Query: 488 aatgaaataacttttaaagatgtgtagtaggtgtattctttctataaataattctttagt 547
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 aatgaaataacttttaaagatgtgtagtaggtgtattctttctataaataattctttagt 260

                                                               
Query: 548 gcgttggttctttatgttcaagaacactataatagtccatgttcttgggatt 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 gcgttggttctttatgttcaagaacactataatagtccatgttcttgggatt 208


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 599
Length of database: 995
Length adjustment: 10
Effective length of query: 589
Effective length of database: 985
Effective search space:   580165
Effective search space used:   580165
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)