Query= MSMg01no102_b15.b1 MSMg01no102_b15.b1 CHROMAT_FILE:
MSMg01no102_b15.b1 PHD_FILE: MSMg01no102_b15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:00:34 2005
(443 letters)
>mm_chr17_38313958_38314800
Length = 843
Score = 839 bits (434), Expect = 0.0
Identities = 440/442 (99%), Gaps = 1/442 (0%)
Strand = Plus / Plus
Query: 3 gaattcttaaattcttc-ccaatcttgaaagattacccataaaggcattgtatcaggata 61
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 gaattcttaaattcttcaccaatcttgaaagattacccataaaggcattgtatcaggata 261
Query: 62 atctactatatttagtacctttctgccaagtctcttcctgataattgatataacttttgt 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 atctactatatttagtacctttctgccaagtctcttcctgataattgatataacttttgt 321
Query: 122 gattaaatcagaaacttttttctatttaagtctttaatttttttactttgagaaaaatcc 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gattaaatcagaaacttttttctatttaagtctttaatttttttactttgagaaaaatcc 381
Query: 182 atttgataatactttctttccagtaaaagaatgagttgaaaaattaaccaaaataaagta 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 atttgataatactttctttccagtaaaagaatgagttgaaaaattaaccaaaataaagta 441
Query: 242 aattttgggatctatgagatcttcatatgcatcttgcagtcttctttatactaaggtctg 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 aattttgggatctatgagatcttcatatgcatcttgcagtcttctttatactaaggtctg 501
Query: 302 ctgtttatctaccaccttttttagttgtactcataaagttattgtgcatggtgtggcaat 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 ctgtttatctaccaccttttttagttgtactcataaagttattgtgcatggtgtggcaat 561
Query: 362 ttaaatgatgacttcattctctcatatatctggtttcagtacttattcagattttctcca 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 ttaaatgatgacttcattctctcatatatctggtttcagtacttattcagattttctcca 621
Query: 422 gtcccaaatttgtgtatacatc 443
||| ||||||||||||||||||
Sbjct: 622 gtctcaaatttgtgtatacatc 643
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 443
Length of database: 843
Length adjustment: 10
Effective length of query: 433
Effective length of database: 833
Effective search space: 360689
Effective search space used: 360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no102_b15.g1 MSMg01no102_b15.g1 CHROMAT_FILE:
MSMg01no102_b15.g1 PHD_FILE: MSMg01no102_b15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:00:35 2005
(560 letters)
>mm_chr17_38445191_38446150
Length = 960
Score = 884 bits (457), Expect = 0.0
Identities = 466/469 (99%)
Strand = Plus / Minus
Query: 1 ttatggtattcacaaaattagtgtcaccctttaaatttcttcatacaaaattggagacat 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 469 ttatggtattcacaaaattagtgtcaccctttaaatttcttcatagaaaattggagacat 410
Query: 61 ttaaaactgttaaatatccatataatgatatttctcttggattaaagtatttattattaa 120
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 409 ttaaaactgttaaatatccacataatgatatttctcttggattaaagtatttattattaa 350
Query: 121 atgatgcatacattatagtaaagggaaatgatgaatagctgcgcagagtggtggttttgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 atgatgcatacattatagtaaagggaaatgatgaatagctgcgcagagtggtggttttgt 290
Query: 181 gtatgtgtgaggtattggtacattcagtgatagttgaggatgataaaagtttatctatga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 gtatgtgtgaggtattggtacattcagtgatagttgaggatgataaaagtttatctatga 230
Query: 241 aatttgtgcactaaaaggaacggaaatagatataatataaattttagttaatattttaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 aatttgtgcactaaaaggaacggaaatagatataatataaattttagttaatattttaag 170
Query: 301 aaaaaagaaaaggaattattgatatgtaatacattggttgtaattaaaatatattataat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 aaaaaagaaaaggaattattgatatgtaatacattggttgtaattaaaatatattataat 110
Query: 361 agcagtaacaggtaacgtgtagtgaacttatttttacacacatgaaaatttacacatgaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 109 agcagtaacaggtaacgtgtagtgaacttatttttacacacatgaaaatttacacataaa 50
Query: 421 actttatccaaagaataattcaatttaaatggagcaaaaataatttcat 469
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49 actttatccaaagaataattcaatttaaatggagcaaaaataatttcat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 560
Length of database: 960
Length adjustment: 10
Effective length of query: 550
Effective length of database: 950
Effective search space: 522500
Effective search space used: 522500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
