XXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCAAGGACCGCGGAATTCTTG
TTGATCCCATAGATTGATATAGTGTTGACTTCTCTTAAAGCTCAAGGCTA
AGAAAAATCTAGTGAGACAAATATGTTAGGCAAGAGAAAACATGTGGATA
GATATTTCACCTTTATTTGTATTTTTCAGAATTTGGAAACCATGTTCTAA
GCTGCTAATTACACCAAGTACCATTTTTTTAACAGTTGGAAGCAACACAT
TAATTCTTTGTTGGCTTTCTTACTTTTAACTTTCATTCTCTCAAATCTTC
CATTTCTGAGCTAATGGGATGTTTTTCCAAAAGGACTTTTGCAGTGGAAA
TCTTTCCCAGGTTAGTTCATAGGTGCTGTTCCAGAAACACTTAATAAAAT
TCTAGTAAACAGAAAACCTGTTTTAAATTCTGGTGGAAATGTAAACAAGT
AAATGAGGAGTACATATATAAAACATTGAATAGTAAATATAATCCTATAT
AAGACGGGGAGCATCTTCATGCAATGAATCTTTGAAAAGAAAATAGCTAT
AAAATGAAATTTACATGCAGCGAGATTTACCTATATAAAATGAGAGATTC
CGTGTTTATACTTGCACTATTGTGCAACAGATACAATAACCTACAAGCAC
GATTCCCTACCACTATTACTGATGCCCCTGTATTCTAATAGAGAGGAATC
T

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXCTTAAAGAAGAAACAAATAAATATATTAAATAGAGAAAAACTCA
ATCAAACAGGTGAAAGAATTGAACAAAATGGTCCAAGATTTCAAAATGGA
AGTAGAATCAATAAAGAAAACAAAAGAGGAGGCAACCCTAGAAATGGAAA
ACCTGGGAAAGAGGTCAGGATCAATAAATACAAACATCAAAAACAGAATA
CAAGAGATAGAAGAAAGAATCTCAGGCATAGGAGATACCTTGGATGATAT
TGACACAACTGTCAAAGAAAATTCGAAACATAAAAAAAAATGCCTAATTC
CAAATATCCAGGAAATCCAGAACAAAATGAAAAGAATAAATCAAAGATGT
ATAGGAATAGAAGAGAGCAAAGTTTCCCACCTCAAAAGACAAGAGAAATC
TCTGCAATGAAATTATAGAAGAAAACTTCTGTAATCTAAAGAAAATAATG
TACATAAATGTACAAGAAGTCTACAGAATACCAAATAAATTGGACCAGGA
AAAAAAAATCATCACTTAATAATCAAAACACTAAATTCACAGAACAAAGA
AAGAATATTATAAGTGGTGAAGAAAAATGATGAAGTAATTTATAAAGGCA
GACCTATCATAATTACACCAGAGTTCTCAACAGAGACCCTAAAAGCCAG

Query= MSMg01no102_d17.b1 MSMg01no102_d17.b1 CHROMAT_FILE:
MSMg01no102_d17.b1 PHD_FILE: MSMg01no102_d17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:00:45 2005
         (504 letters)



>mm_chr17_92386754_92387658
          Length = 905

 Score =  880 bits (455), Expect = 0.0
 Identities = 493/507 (97%), Gaps = 5/507 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttgatatagtgttgacttctcttaaagctcaaggctaagaaaaatctagtgagacaaata 60
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 ttgatatagtgttgacttctcttaaagctcaaggctaagaaaaatctaatgagacaaata 260

                                                                       
Query: 61  tgttaggcaagagaaaacatgtggatagatatttcacctttatttgtatttttcagaatt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgttaggcaagagaaaacatgtggatagatatttcacctttatttgtatttttcagaatt 320

                                                                       
Query: 121 tggaaaccatgttctaagctgctaattacaccaagtaccattttttt-aacagttggaag 179
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 321 tggaaaccatgttctaagctgctaattacaccaagtaccattttttttaacagttggaag 380

                                                                       
Query: 180 caacacattaattctttgttggctttcttacttttaactttcattctctcaaatcttcca 239
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 381 caacacattaattctttgttggctttcttacttttaactttcattctctcgaatcttcca 440

                                                                       
Query: 240 tttctgagctaatgggatgtttttccaaaaggacttttgcagtggaaatctttcccaggt 299
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttctgagctattgggatgtttttccaaaaggacttttgcagtggaaatctttcccaggt 500

                                                                       
Query: 300 tagttcataggtgctgttccagaaacacttaataaaattctagtaaacagaaaacc--tg 357
           |||||||||| ||||||||||||||||||||||||||||||||||||||||||  |  ||
Sbjct: 501 tagttcatagatgctgttccagaaacacttaataaaattctagtaaacagaaa--caatg 558

                                                                       
Query: 358 ttttaaattctggtggaaatgtaaacaagtaaatgaggagtacatatataaaacattgaa 417
           |||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 ttttgaattctggtaaaaatgtaaacaagtaaatgaggagtacatatataaaacattgaa 618

                                                                       
Query: 418 tagtaaatataatcctatataagacggggagcatcttcatgcaatgaatctttgaaaaga 477
           ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 619 tagtaaatataatcctatataagacagggtgcatcttcatgcaatgaatctttgaaaaga 678

                                      
Query: 478 aaatagctataaaatgaaatttacatg 504
           |||||||||||||||||||||||||||
Sbjct: 679 aaatagctataaaatgaaatttacatg 705


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 504
Length of database: 905
Length adjustment: 10
Effective length of query: 494
Effective length of database: 895
Effective search space:   442130
Effective search space used:   442130
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)