Query= MSMg01no109_e12.b1 MSMg01no109_e12.b1 CHROMAT_FILE:
MSMg01no109_e12.b1 PHD_FILE: MSMg01no109_e12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:12:26 2005
(323 letters)
>mm_chr17_10999400_11000123
Length = 724
Score = 572 bits (296), Expect = e-168
Identities = 314/320 (98%), Gaps = 1/320 (0%)
Strand = Plus / Plus
Query: 5 gaattcagtacttcc-ataaaggccgtggcttttaaaacaaaattttttcctatttgtga 63
||||||| |||| || |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 205 gaattcaatactgccaataaaggccgtggcttttaaaacaaatttttttcctatttgtga 264
Query: 64 agttgcagactcaagggtcccctgggcctggtaccccagcattcactctacagccttgct 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agttgcagactcaagggtcccctgggcctggtaccccagcattcactctacagccttgct 324
Query: 124 gcatggcttggctcctgggtgaattactccgtctgtctgtttgcattaggatcaaccagc 183
|||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 325 gcatggctcggctcctgggtgaattactccgtctgcctgtttgcattaggatcaaccagc 384
Query: 184 ctcctgagaaggaaatcaagcattggtacagagacggagcaagaaaatgcatgtagttgg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctcctgagaaggaaatcaagcattggtacagagacggagcaagaaaatgcatgtagttgg 444
Query: 244 gtaaatgtaatgcatttcagtatttaaatctgtacatttttgctaggaatatcttcaaca 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gtaaatgtaatgcatttcagtatttaaatctgtacatttttgctaggaatatcttcaaca 504
Query: 304 aggcctttcaaatttaagtg 323
||||||||||||||||||||
Sbjct: 505 aggcctttcaaatttaagtg 524
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 724
Length adjustment: 9
Effective length of query: 314
Effective length of database: 715
Effective search space: 224510
Effective search space used: 224510
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no109_e12.g1 MSMg01no109_e12.g1 CHROMAT_FILE:
MSMg01no109_e12.g1 PHD_FILE: MSMg01no109_e12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:12:26 2005
(103 letters)
>mm_chr17_11115629_11116131
Length = 503
Score = 192 bits (99), Expect = 7e-54
Identities = 102/103 (99%)
Strand = Plus / Minus
Query: 1 ttcagatgagactagtgagaggatccaccagccacaacacagacacacaacctaaggaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 ttcagatgagactagtgagaggatccaccagccacaacacagacacacaacctaaggaaa 244
Query: 61 caattctgttaaagacaccaaggttcaaagttatgtgttaatg 103
||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 243 caattgtgttaaagacaccaaggttcaaagttatgtgttaatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 103
Length of database: 503
Length adjustment: 8
Effective length of query: 95
Effective length of database: 495
Effective search space: 47025
Effective search space used: 47025
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
|
