Query= MSMg01no110_a04.b1 MSMg01no110_a04.b1 CHROMAT_FILE:
MSMg01no110_a04.b1 PHD_FILE: MSMg01no110_a04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:13:26 2005
(512 letters)
>mm_chr17_15056009_15056920
Length = 912
Score = 959 bits (496), Expect = 0.0
Identities = 505/508 (99%)
Strand = Plus / Plus
Query: 5 gaattcaattcttacccttgaagtgtaaagcggcttccaattcaaagcttgccaggttca 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaattcttacccttgaagtgtaaagcggcttccaattcaaagcttgccaggttca 264
Query: 65 atatgaatagagctgttgagcttccaatccatagacatttggtgcactcagaagcaaaac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atatgaatagagctgttgagcttccaatccatagacatttggtgcactcagaagcaaaac 324
Query: 125 taatcttaggaaaagagaaacaaacagtcttccttcaggctagctccccagcactcctgt 184
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 taatcttaggaaaaaagaaacaaacagtcttccttcaggctagctccccagcactcctgt 384
Query: 185 tcttgtgaggatggacgcatacctgtgtgaataagccacaagctgtctccactgacacct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tcttgtgaggatggacgcatacctgtgtgaataagccacaagctgtctccactgacacct 444
Query: 245 cagctaatcacttcttctcccatagctatactctggaactgggagctgagtttccgtctg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cagctaatcacttcttctcccatagctatactctggaactgggagctgagtttccgtctg 504
Query: 305 attgagtggttgacagctacttctgccattggaagcaggtatctccaatggtcacagcat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 attgagtggttgacagctacttctgccattggaagcaggtatctccaatggtcacagcat 564
Query: 365 gaccactgctcaactctgatctgtgtgatttgtcttttcttctgagtttataaaagcagt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gaccactgctcaactctgatctgtgtgatttgtcttttcttctgagtttataaaagcagt 624
Query: 425 tgatgcctaagtcattcaggagcttaccagatcatgtaaggatctaggcatgtgctcaca 484
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tgatgcccaagtcattcaggagcttaccagatcatgtaaggatctaggcatgtgctcaca 684
Query: 485 tcaatgtcgccaatgtacctgaaggtgc 512
||| ||||||||||||||||||||||||
Sbjct: 685 tcagtgtcgccaatgtacctgaaggtgc 712
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 512
Length of database: 912
Length adjustment: 10
Effective length of query: 502
Effective length of database: 902
Effective search space: 452804
Effective search space used: 452804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no110_a04.g1 MSMg01no110_a04.g1 CHROMAT_FILE:
MSMg01no110_a04.g1 PHD_FILE: MSMg01no110_a04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:13:26 2005
(157 letters)
>mm_chr17_15161917_15162474
Length = 558
Score = 275 bits (142), Expect = 1e-78
Identities = 154/158 (97%), Gaps = 1/158 (0%)
Strand = Plus / Minus
Query: 1 ccaatcctgtgtcctgcatgtgactgtgctgact-ttgtcatatgattttgggaaccttc 59
|||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||
Sbjct: 358 ccaatcctgtgtcctgcaggtgactgtgctgactcttgtcatatgattttgggaaccttc 299
Query: 60 cctatgttctccttgcctgactgggttccgttcaacctgagtgctgcagtgacttttccc 119
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 298 cctatgttctccttgcctgactgggttccgttcaacctgagtgctgctgtgacttttccc 239
Query: 120 gtggccatgggggtcactacgccaaggtcacaggagaa 157
||||||||||||| ||||||||||||||||||||||||
Sbjct: 238 gtggccatgggggccactacgccaaggtcacaggagaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 157
Length of database: 558
Length adjustment: 8
Effective length of query: 149
Effective length of database: 550
Effective search space: 81950
Effective search space used: 81950
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
