ATCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCGAGAATGCGCGGA
ATTCACCAGAAACTTGCGAGGTGAGAGACCCTCAAGACTTAAAGGGAGGG
ATCTTAGATGAAATGTCCAATAATAGGGAAAAGGAATTTATAGAGCCCAC
CTGCATCAGAAAGACAGGACATCAAGTGAGGGATGGGGTTGCCTTCTCAC
AGTCACCACTCTGACCCATAATTGTTCCTCTCTGAAATAATTAAAGGGAT
GGAAATAGAGAGGAGCCCGAGGAAAAGGAGGTCAAGAGACAGGCCGAAAG
TAGGATCCAGCTCAAGGAGAGGTCCCAAGGCCTGACACTATTACTGAGGC
TATGGAGCACTTACAAAAAGGGACCTATCATGACTGCCCTCCTAAAGACC
CAACAAGCAGCTGAAAGAGTCAGATGCAGATATTTGCACCCAACCAATGA
CAGCTAACCCCTGTTGTTGAATTAGTGAAACTGAAGGCAGCTGAGGAGAA
GGGAAACCTTGGAGGAGCATCAGCAGTCTCAATTAATCTGTACTCCCGAG
ATCTCTCAAACTTTGGACCACCAAACAAATAGCATACACCAGCTGACGTG
AAGCCCCCCCAACACACATACAGTATAGGACTTCCAAGTCTGTGTTCATT
CAGAGATAATGCACCTAACCCTCAAGAGATTGGATGCCCCAGGGTGTTTA
GAGGCCAAGTGCTGTGGGGGATGGTGAC

CCGATGAAGTGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTTCTGCTCCCACCTCAGCTTCACATTG
AGAATATTAAAATTAATGACAAACTTTATTTCTGAACTCAATTTTTAGGA
GTGCTTTACTCCCTGACACATATCTCAGTCCTTCCAATGTGCACCATTAA
TATCTGGCTCATCTCCCTTTTCACATGTCCAGTTCCCTCATGTCATTAGT
GGGTTCTATAACTGCCAGTAATGGGGGAAGGGGTTACGACCTTACTCTAT
TTCCATAGCATGGTAAATGCTCCGAGATCTCAGTGAGAATGCTGTATCCC
AACAACCAGAATTTTTATATTGTTATGTAATTTTATAAAATTATCAGGTA
TATCTGTGATAATTATCCAAGTAAAACTTACCATTCCTTCAGAGCACATT
GATGGGAGCAGCACAATTATGAGAAACAACATCACTGGGAAAGAAGTCAT
GGCTGACACTAAGCAAAGAAAAATCCTGGTTTAACTAAGCAGTGCATGAG
ATACAGATATAACCAACACATTGATAGAAACTATGCCAAAACAACTCTGG
CTGATGAATGCATTAAAAAAAATAATAAGGGGAGAGTTGCCAGGTGAGGT
TGCTATACTTTCATTGTGCCCACCTTGTCTCAACTTGGTAGGATGATAAG
CTAAATGACCTGACTAATGTTGTA

Query= MSMg01no117_g22.g1 MSMg01no117_g22.g1 CHROMAT_FILE:
MSMg01no117_g22.g1 PHD_FILE: MSMg01no117_g22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:23:59 2005
         (538 letters)



>mm_chr17_40636660_40637598
          Length = 939

 Score =  919 bits (475), Expect = 0.0
 Identities = 484/487 (99%), Gaps = 1/487 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttctgctcccacctca-gcttcacattgagaatattaaaattaatgacaaactttatttc 59
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 ttctgctcccacctcatgcttcacattgagaatattaaaattaatgacaaactttatttc 428

                                                                       
Query: 60  tgaactcaatttttaggagtgctttactccctgacacatatctcagtccttccaatgtgc 119
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 tgaactcaatctttaggagtgctttactccctgacacatatctcagtccttccaatgtgc 368

                                                                       
Query: 120 accattaatatctggctcatctcccttttcacatgtccagttccctcatgtcattagtgg 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 accattaatatctggctcatctcccttttcacatgtccagttccctcatgtcattagtgg 308

                                                                       
Query: 180 gttctataactgccagtaatgggggaaggggttacgaccttactctatttccatagcatg 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 gttctataactgccagtaatgggggaaggggttacgaccttactctatttccatagcatg 248

                                                                       
Query: 240 gtaaatgctccgagatctcagtgagaatgctgtatcccaacaaccagaatttttatattg 299
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 gtaaatgctccgagacctcagtgagaatgctgtatcccaacaaccagaatttttatattg 188

                                                                       
Query: 300 ttatgtaattttataaaattatcaggtatatctgtgataattatccaagtaaaacttacc 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 ttatgtaattttataaaattatcaggtatatctgtgataattatccaagtaaaacttacc 128

                                                                       
Query: 360 attccttcagagcacattgatgggagcagcacaattatgagaaacaacatcactgggaaa 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 attccttcagagcacattgatgggagcagcacaattatgagaaacaacatcactgggaaa 68

                                                                       
Query: 420 gaagtcatggctgacactaagcaaagaaaaatcctggtttaactaagcagtgcatgagat 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67  gaagtcatggctgacactaagcaaagaaaaatcctggtttaactaagcagtgcatgagat 8

                  
Query: 480 acagata 486
           |||||||
Sbjct: 7   acagata 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 538
Length of database: 939
Length adjustment: 10
Effective length of query: 528
Effective length of database: 929
Effective search space:   490512
Effective search space used:   490512
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)