ATTCCCCGNGGATATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXCGCGGAATTCTCAAATTTCTCTTTTAGTTTCTTCAATGAC
CTACAGTCCATTCAAATATATTGTTTGCCTTGCTACTGATTGCTGTGTCC
ATCCCCAAAATCCTTATGACCCCCCCAACACACACACACAAATTCCATTT
GTGTTATTTGTCTCATTGGAGCACGGCCGAACTCTCTGTGCCTCACCTTT
TACATAGAACCAAGTCTTTCTCCCCACTGCATCCCTGCCAGAAGCCATCA
CTGCTTCATATTTCAGAATCTTTACTTCTTTGCTGAATTTCTTGTCCAAT
GCTAAATACATCACTCAAGATTAAAATTTGCTTCTTGGATGCATTTACAT
TTATTTGAATTCTGAAGATATTGATTGCCTTTAATATTAGAACTTGGATT
CCTTTTTCAAATTTTTATTATTTTTATGTACTCTGGTGTTTTGCCTGTGT
GAGGGTGTTGGATTCCCTGGAAATGGAGTTACAGACAGTTTTGAGCTACC
ATGAGCACGATAGGAATTGTACCCAGGTCTTAACTGTTGATCCATCCCTC
CAATTCCTAGAATTTGAAGTCTTTACTCTGCTATGTGAGTTTAGTTTTTA
AAGACCAATTGAAAGAGTCGTACGCCTTGATTCTAGCATTTCATGCTTGT
ATATCACTATCTGCGTATCCATCAG

CAATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCATGGGATCAGGTACCAGGAAGGGATT
AAGGAAAAGTTATACTGCAAACTTTTAAATTGAAGGATAAAAATAAGGCA
AATTTGCTATAAGGCCTAGGTTGGGGCTTTTTGGAAAGGTTCTTGTTATT
CTCTATCCTTATTATTGAAAATAATTTTCATACAATATATTCTGATTATC
CTTTCCCATCCCCCACACTTCACAGGTCCTTCTCCCCACAGGTCTACAAT
TCCACAGCTTCTTTTTCTGTTTAGAAAGCTGAAGGGGGATGGGATGGGGG
CTTACGGAAGGGAGACCAAGAAGGGGGACAACAATTGGAATGTAATAAAT
GAAATAATCAAAAATGAAATAAAATAAAATCAGTAAAAAATAAATAAAAT
TAAATTACTTTGATTCTTTAAACAAAGAGAAAGCAACCAAAAGTCAAAAA
AAATCATAATAAAACAAAACACAATGAGAGACCATTAAGAAACACACACA
CACAAAATCCATAACCCATAAAAACACAAAATCAGAAACATTATCTACAA
ACAAAAGACCAGGAAGACAAGAAAAAAAGTCCAAACAAAGCAACACGAAA
CAAAAAGTCTACAAAAATGTAATTGAGTTCATCTTACGCTGGTGATCTAC
TGCAGGGCATAAG

Query= MSMg01no118_l15.b1 MSMg01no118_l15.b1 CHROMAT_FILE:
MSMg01no118_l15.b1 PHD_FILE: MSMg01no118_l15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:25:40 2005
         (608 letters)



>mm_chr17_65498372_65499379
          Length = 1008

 Score = 1133 bits (586), Expect = 0.0
 Identities = 598/602 (99%), Gaps = 1/602 (0%)
 Strand = Plus / Minus

                                                                       
Query: 8   ttctcaaatttctcttttagtttcttcaatgacctacagtccattcaaa-tatattgttt 66
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 898 ttctcaaatttctcttttagtttcttcaatgacctacagtccattcaaagtatattgttt 839

                                                                       
Query: 67  gccttgctactgattgctgtgtccatccccaaaatccttatgacccccccaacacacaca 126
           ||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 838 gccttgctagtgattgctgtgtccatccccaaaatccttatgacccccccaacatacaca 779

                                                                       
Query: 127 cacaaattccatttgtgttatttgtctcattggagcacggccgaactctctgtgcctcac 186
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 778 cacaaattccatttgtgttatttgtctcattggagcacggccaaactctctgtgcctcac 719

                                                                       
Query: 187 cttttacatagaaccaagtctttctccccactgcatccctgccagaagccatcactgctt 246
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 cttttacatagaaccaagtctttctccccactgcatccctgccagaagccatcactgctt 659

                                                                       
Query: 247 catatttcagaatctttacttctttgctgaatttcttgtccaatgctaaatacatcactc 306
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 catatttcagaatctttacttctttgctgaatttcttgtccaatgctaaatacatcactc 599

                                                                       
Query: 307 aagattaaaatttgcttcttggatgcatttacatttatttgaattctgaagatattgatt 366
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 aagattaaaatttgcttcttggatgcatttacatttatttgaattctgaagatattgatt 539

                                                                       
Query: 367 gcctttaatattagaacttggattcctttttcaaatttttattatttttatgtactctgg 426
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 gcctttaatattagaacttggattcctttttcaaatttttattatttttatgtactctgg 479

                                                                       
Query: 427 tgttttgcctgtgtgagggtgttggattccctggaaatggagttacagacagttttgagc 486
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 tgttttgcctgtgtgagggtgttggattccctggaaatggagttacagacagttttgagc 419

                                                                       
Query: 487 taccatgagcacgataggaattgtacccaggtcttaactgttgatccatccctccaattc 546
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 taccatgagcacgataggaattgtacccaggtcttaactgttgatccatccctccaattc 359

                                                                       
Query: 547 ctagaatttgaagtctttactctgctatgtgagtttagtttttaaagaccaattgaaaga 606
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 ctagaatttgaagtctttactctgctatgtgagtttagtttttaaagaccaattgaaaga 299

             
Query: 607 gt 608
           ||
Sbjct: 298 gt 297


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 608
Length of database: 1008
Length adjustment: 10
Effective length of query: 598
Effective length of database: 998
Effective search space:   596804
Effective search space used:   596804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)