CTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTGCTTGGCTCCAGTCACCAGCCTGTGAGAGACATCTTTGTCCCAC
CTAGAACCCTGGTTCCCCTTCTTGATATGTCACCTTTCAAGACACGCATT
CCTGCAGGTTCTGGACAGTATAGGACATATAGTGGTCTGCCGTACCATAA
CTAAAGGTAGATCCAGCATAGTGTTGCTAACTAGAAATCATGTGTTTGAA
ACTCTTACTTAAGTTTAAATGGACAAAGTGGAAATATTGGTTCACATTCC
CAGAGTTTAATCGGTTCAAGAATTTTGTTAGCAGTGGACATACTACAGAC
CATACATGATGTGGAGAGGGTTGGCTTGAGTGTATTTAAGTCAGTCGCGA
GTAAGGTTACCTAAAGGAAGTGACAGAGCAGATAATAGAAGTATTCTTTG
TACAATGAGCCCTTCATGTTGGGGGCTGAGATAAAGCAGAGGGCATAAGA
AATGCACATCACACATGTCATGGGATACATGAGCAAAAACTTCCTGCCAT
AGCTTCCTGAAGAATCCTTCGAACCATCCAAAGAATTAGGCCCTAACAGT
TGAAAACGGCACCTTTATAAAAAAGCCCGTTAAGTGAAAACCCTTCTTGG
CTATCTCCTGAAAGGATTCTAGGGTTTCTAATTGTTTGGGGAAACT

NNAACGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXTTCTGAAATTCGGGTTTTCCTTTTGTTTGTATAG
CAGTGGTGGATAGAGCCTATGTCTTGGTTACTGTTTCTTTTGCTGAAATG
AGACCGCCATGACCAAAGCAATTCGCACAAGAAAGAGTTGATTAGAGATT
ATAGTTTGAGAGGGCGAGAGTCCATTGTAATCACGGTGGGGAGCGGGGCA
GCAGGGAGCAGGCAGCAGGCAGCAGGCAGCAGGCAGCAGGCAGGCCGGCA
GGCAGCAGGCAGCGAGGCACGCACGAGGCAGCAGGCAGCAAGCAGGCAGG
CAGCAGGCAGCAGGCAGCAAGCAGGCAGGCACCACGCAGCACGCAGGCAG
GCCGGCAGCACGCAGGCAGGCACGCACGCGCGGCAGGCCGGTAGGCATGC
AGTAGGCAGTAGGCAGCGGGTACGCAGCAGGCAGCAGGCACCAGGCCTGC
AGCCGGCATTCGGCAGCATGCATCACGCTTCAGGTAGGCTGCAGGCTGGT
AGGCAGGCAGCAGTGTACACGTCGGCACGGAGGCACCAGGTATCAGGCAG
GTACGGAGCCCCCTTGCTTGTATGGAGGCAGCATGCGCGTATGTTGGTTA
GCTGCATGGCTCTTTTAGTACTTGCTCCATGCTTTCTCGTCTTCATGTCT
TAGTTCGCTATTTCTT

Query= MSMg01no118_o01.b1 MSMg01no118_o01.b1 CHROMAT_FILE:
MSMg01no118_o01.b1 PHD_FILE: MSMg01no118_o01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:25:51 2005
         (445 letters)



>mm_chr17_74294139_74294981
          Length = 843

 Score =  739 bits (382), Expect = 0.0
 Identities = 427/442 (96%), Gaps = 4/442 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctgcttggctccagtcaccagcctgtgagagacatctttgtcccacctagaaccc 64
           |||||||||||||| | |||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 205 gaattctgcttggcacgagtcaccagcctgtaagagacatctttgtcccacctagaaccc 264

                                                                       
Query: 65  tggttccccttcttgatatgtcacctttcaagacacgcattcctgcaggttctggacagt 124
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tggttctccttcttgatatgtcacctttcaagacacgcattcctgcaggttctggacagt 324

                                                                       
Query: 125 ataggacatatagtggtctgccgtaccataactaaaggtagatccagcatagtgttgcta 184
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 325 ataggacatatagtggtctgccgtaccataactaaaggtagacccagcatagtgttgcta 384

                                                                       
Query: 185 actagaaatcatgtgtttgaaactcttacttaagtttaaatggacaaagtggaaatattg 244
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 actagaaatcatgtgttt-aaactcttacttaagtttaaatggacaaagtggaaatattg 443

                                                                       
Query: 245 gttcacattcccagagtttaatcggttcaagaattttgttagcagtggacatactacaga 304
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gttcacattcccagattttaatcggttcaagaattttgttagcagtggacatactacaga 503

                                                                       
Query: 305 ccatacatgatgtggagagggttggcttgagtgtatttaagtcagtcgcgagtaaggtta 364
           |||||||||||||||| |||||||||||  ||||||||||||||||| | ||||||||||
Sbjct: 504 ccatacatgatgtggatagggttggctttcgtgtatttaagtcagtctc-agtaaggtta 562

                                                                       
Query: 365 cctaaaggaagtgacagagcagataatagaagtattctttgtacaatgag-cccttcatg 423
           |||||||| ||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 563 cctaaagggagtgacagagcagataatagaagtattctttgtacaatg-gacccttcatg 621

                                 
Query: 424 ttgggggctgagataaagcaga 445
           ||||||||||||||||||||||
Sbjct: 622 ttgggggctgagataaagcaga 643


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 445
Length of database: 843
Length adjustment: 10
Effective length of query: 435
Effective length of database: 833
Effective search space:   362355
Effective search space used:   362355
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)