Query= MSMg01no119_l01.b1 MSMg01no119_l01.b1 CHROMAT_FILE:
MSMg01no119_l01.b1 PHD_FILE: MSMg01no119_l01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:26:54 2005
(576 letters)
>mm_chr17_93144031_93145006
Length = 976
Score = 580 bits (300), Expect = e-170
Identities = 327/336 (97%), Gaps = 1/336 (0%)
Strand = Plus / Minus
Query: 242 tgaaagacagattcataagcttgtcctgatatttgcatcataccctttccattgattagt 301
||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 976 tgaaagacagaagcataagcttgtcctgatatttacatcataccctttccattgattagt 917
Query: 302 ttctacatcattttaaataatatatacttctagcttgtgtctcctttaggaaaaaatgct 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 916 ttctacatcattttaaataatatatacttctagcttgtgtctcctttaggaaaaaatgct 857
Query: 362 tttggatggcagtaaaaagaattatctttaaagtg-aaaaaaatattgttttatttaaat 420
||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 856 tttggatggtggtaaaaagaattatctttaaagtgaaaaaaaatattgttttatttaaat 797
Query: 421 ttagtatatccatatagcatgtccatataatatagacatatgtgtgatgatttagttggg 480
||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 796 ttagtatatccatatagtatgtccatataatatagccatatgtgtgatgatttagttggg 737
Query: 481 tataaatacacccttttatttaattagctaatttttatgtgaaatttaggtatgtgatta 540
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 736 tataaatacacccttttatttaattagttaatttttatgtgaaatttaggtatgtgatta 677
Query: 541 ttacagtccaccacatcttgacatcttagatgttaa 576
||||||||||||||||||||||||||||||||||||
Sbjct: 676 ttacagtccaccacatcttgacatcttagatgttaa 641
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 576
Length of database: 976
Length adjustment: 10
Effective length of query: 566
Effective length of database: 966
Effective search space: 546756
Effective search space used: 546756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no119_l01.g1 MSMg01no119_l01.g1 CHROMAT_FILE:
MSMg01no119_l01.g1 PHD_FILE: MSMg01no119_l01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:26:54 2005
(502 letters)
>mm_chr17_93028454_93029354
Length = 901
Score = 864 bits (447), Expect = 0.0
Identities = 489/505 (96%), Gaps = 5/505 (0%)
Strand = Plus / Plus
Query: 1 tctgactaggattgtaattagtattatttttgccttgtgcccttatctttaaccacagac 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctgactaggtttgtaattagtattatttttgccttgtgcccttatctttaaccacagac 260
Query: 61 tctccttaaatgggaaactcagttatctggaggccaactgtacatgaagcaattattcac 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctccttaaatgggaaactcagttatctggaggccaactgtacatgaagcaattattcag 320
Query: 121 tattagtgcctgggcaattacctgattagataattggtgaaattcaagctggtttctcct 180
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 321 tattagtgcctgggcaattacctgattagataattggtgaaatgcaagctggtttctcct 380
Query: 181 tgagttctcatgctttttttttttccataatttttcacagtattatttgaaatcatttgg 240
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgagttctcatgctttttttttt-ccataatttttcacagtattatttgaaatcatttgg 439
Query: 241 ggagataagatttcctaaagaattaggtgtaaatttgggacatagagtgaggttagattt 300
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 440 ggagataagatttcctaaagaattgggtgtaaatttgggacatagagtgaggttagattt 499
Query: 301 gctaatatgtctgatatttactgttgagatattgaggaaggttagatttgctcttgctct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gctaatatgtctgatatttactgttgagatattgaggaaggttagatttgctcttgctct 559
Query: 361 tgagttttaatgttaggtttgagaagtggagactgacatatcattaattttgagtttaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tgagttttaatgttaggtttgagaagtggagactgacatatcattaattttgagtttaac 619
Query: 421 ctattttcattatattttatctggtgtctctgtgtgtgtgtgtct----gtgtgtgtgtg 476
||||||||||||||||||||||||||||||| | | | | | ||| |||||||||||
Sbjct: 620 ctattttcattatattttatctggtgtctctctctctctctctctctctgtgtgtgtgtg 679
Query: 477 tgtgtgtgtgtgtgtgtgtgtgtgt 501
||||||||||||||||| |||||||
Sbjct: 680 tgtgtgtgtgtgtgtgtatgtgtgt 704
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 7
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 502
Length of database: 901
Length adjustment: 10
Effective length of query: 492
Effective length of database: 891
Effective search space: 438372
Effective search space used: 438372
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
