Query= MSMg01no121_g22.b1 MSMg01no121_g22.b1 CHROMAT_FILE:
MSMg01no121_g22.b1 PHD_FILE: MSMg01no121_g22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:29:12 2005
(115 letters)
>mm_chr17_55925741_55926254
Length = 514
Score = 192 bits (99), Expect = 8e-54
Identities = 108/111 (97%), Gaps = 1/111 (0%)
Strand = Plus / Plus
Query: 1 acattacccatgtagcttagtaaatgaatgaggcacaggcatcatacataggcaatcatg 60
||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 201 acattacccatgtagcttagtaaatgaatgagggacaggcatcatacataggcagtcatg 260
Query: 61 gcactaaaacatccaatccaacatgaatggcaactcaaaaaaacgtacatc 111
|||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 261 gcactaaaacatccaatccaacatgaatggcaactcaaaaaa-cgtacatc 310
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 115
Length of database: 514
Length adjustment: 8
Effective length of query: 107
Effective length of database: 506
Effective search space: 54142
Effective search space used: 54142
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no121_g22.g1 MSMg01no121_g22.g1 CHROMAT_FILE:
MSMg01no121_g22.g1 PHD_FILE: MSMg01no121_g22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:29:12 2005
(491 letters)
>mm_chr17_56003813_56004703
Length = 891
Score = 919 bits (475), Expect = 0.0
Identities = 487/491 (99%)
Strand = Plus / Minus
Query: 1 atactgacaaaatccccaaggaaactaataaatgaggagtagtcttggctaacacactca 60
|||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 691 atactgacaaaatccccaaggaaactaataaatgaggaatagtcttgggtaacacactca 632
Query: 61 tttcccccactgagctctctcactagtgtttaagaatagtagaactattccatcattaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 tttcccccactgagctctctcactagtgtttaagaatagtagaactattccatcattaac 572
Query: 121 atattgtctccttttcaaattgtaggcatattgtcatctaaaaatacatgaacacaggcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 atattgtctccttttcaaattgtaggcatattgtcatctaaaaatacatgaacacaggcc 512
Query: 181 aatttgaataatctactttcaattcaaaatgacatttatgttgtcatttattatcttttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 aatttgaataatctactttcaattcaaaatgacatttatgttgtcatttattatcttttg 452
Query: 241 tattttattagtttattctgaggcctaaaacttgttcttaccattttctcagaaacacaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 tattttattagtttattctgaggcctaaaacttgttcttaccattttctcagaaacacaa 392
Query: 301 atgaaagccagagaattgtaacagggaataaagatggttgctgctaagcttcattctctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 atgaaagccagagaattgtaacagggaataaagatggttgctgctaagcttcattctctt 332
Query: 361 ggatagctgtattactcatacaggtttttctctgagtactacacttggattatatgcaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 ggatagctgtattactcatacaggtttttctctgagtactacacttggattatatgcaca 272
Query: 421 ctctcacatcagtacataacataattattgttgaaactgaaataagagccaatgagttta 480
|||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 271 ctcttacatcagtacataacataattattgttgaaactgaaataagggccaatgagttta 212
Query: 481 ctcaccagttt 491
|||||||||||
Sbjct: 211 ctcaccagttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 491
Length of database: 891
Length adjustment: 10
Effective length of query: 481
Effective length of database: 881
Effective search space: 423761
Effective search space used: 423761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
