Query= MSMg01no122_a13.b1 MSMg01no122_a13.b1 CHROMAT_FILE:
MSMg01no122_a13.b1 PHD_FILE: MSMg01no122_a13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:30:02 2005
(632 letters)
>mm_chr17_4362824_4363855
Length = 1032
Score = 1104 bits (571), Expect = 0.0
Identities = 623/655 (95%), Gaps = 26/655 (3%)
Strand = Plus / Plus
Query: 1 atgagattcctctatacctagattaggag-ccctcaaagagaaggtatgctttatcctag 59
||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||
Sbjct: 201 atgagattcctctatacctagattaggagaccc-caaagagaagatatgctttatcctag 259
Query: 60 acaagttgagctgagaagtttctgggcttaaaggaagggctatatgggagaggcctagca 119
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 acaagttgagctgagaagtctctgggcttaaaggaagggctatatgggagaggcctagca 319
Query: 120 atccagcttgctgtttggctagccacccctcacattccaggtctctacccatgaggtcag 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 atccagcttgctgtttggctagccacccctcacattccaggtctctacccatgaggtcag 379
Query: 180 gttagtatcctgctccttcttaccatgggttcaaaaggtaagttcctttgtgttatgtat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gttagtatcctgctccttcttaccatgggttcaaaaggtaagttcctttgtgttatgtat 439
Query: 240 gagaaaaagagggaaaagtgaaaataagataaaatgtcaccagaagctccgcccagcatt 299
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 440 gagaaaaagagggaaaagtgaaaataagataaaatgtcaccagaagctccacccagcatt 499
Query: 300 aaaggatgaaccatgtcatagaagcatgtttagaagatatttccaacaaactataaatcc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 aaaggatgaaccatgtcatagaagcatgtttagaagatatttccaacaaactataaatcc 559
Query: 360 tcagccaaacctcagactgaatattccaaacttcagactgaatattctactgatttgggg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tcagccaaacctcagactgaatattccaaacttcagactgaatattctactgatttgggg 619
Query: 420 gactacaggctaccctgtcatcactctacactgtaaatcaatctctttcccctctcactc 479
||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||
Sbjct: 620 gactacaggctaccctgtcatcactctacactgtaaatcaaactctttcctctctc--tc 677
Query: 480 tctctctctctctctctctctctctctctctctctctctctgtgtgtgtgtgtgtgtgtg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 tctctctctctctctctctctctctctctctctctctctctgtgtgtgtgtgtgtgtgtg 737
Query: 540 t----------------------atgtatgtatctatttgtgtacgaataaccattacac 577
| |||||||||||||||| ||||||||||||||||||||
Sbjct: 738 tgtgtgtatgtgtgtgtatgtgaatgtatgtatctatttatgtacgaataaccattacac 797
Query: 578 atatatatgtatacatcgattatttaaaacttgaattgttggatacttgggcaga 632
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 atatatatgtatacatcgattatttaaaacttgaattgttggatacttgggcaga 852
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 70
Number of extensions: 21
Number of successful extensions: 21
Number of sequences better than 10.0: 1
Number of HSP's gapped: 16
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1032
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1022
Effective search space: 635684
Effective search space used: 635684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no122_a13.g1 MSMg01no122_a13.g1 CHROMAT_FILE:
MSMg01no122_a13.g1 PHD_FILE: MSMg01no122_a13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:30:03 2005
(626 letters)
>mm_chr17_4486678_4487701
Length = 1024
Score = 1110 bits (574), Expect = 0.0
Identities = 613/626 (97%), Gaps = 2/626 (0%)
Strand = Plus / Minus
Query: 1 aagctcaccccttggaccacctagcaggccttccttgataaaaaatagaaggatgcctcc 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 aagctcaccccttgggccacctagcaggccttccttgataaaaaatagaaggatgcctcc 695
Query: 61 aatgccggtaacatgaagaaaagtgtatgtcgttctccatttcctagcataaaaatccct 120
|||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||||
Sbjct: 694 aatg-gggtaacatgaagaaaagtgtgtgtcgttctccatatcctagcataaaaatccct 636
Query: 121 caagtccagatttatctcttggaaacagaatgatattcctatatgaaccttcgatcgcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 caagtccagatttatctcttggaaacagaatgatattcctatatgaaccttcgatcgcct 576
Query: 181 tcctgtttttcttatatacacatatgtagtttacttgtttactatcttgctttaagaaaa 240
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 575 tcctgtttttcttatatacacatatgtagttaacttgtttactatcttgctttaagaaaa 516
Query: 241 gaaacatcttcattttgaaaaaaaatcacctcttctactgaggcttgatctctttgcatt 300
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 gaaacatcttcattttg-aaaaaaatcacctcttctactgaggcttgatctctttgcatt 457
Query: 301 cttatgtaaagtttttatttttaaattcctttgagatatgatgtttctcccacttgactt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 cttatgtaaagtttttatttttaaattcctttgagatatgatgtttctcccacttgactt 397
Query: 361 ctcacaagctgtctatcctatgagtagtcctcagtgtaaaaccctgtgtgccaaggctgc 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 396 ctcacaagctgtctatcctatgagtagtcctcagtgtaaaaccctgtgtgccaaggctac 337
Query: 421 agtcattctaaaccaggggtgagagcaaggaatctgatttttatttaatattcctagtgg 480
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||
Sbjct: 336 agtcattctaaaccaggggtgagagcgaggaatctgatttttatttaatattcctagcgg 277
Query: 481 ctatctcttaagcatcttagcattctctgagatactctgctttgattcaaagggacatac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 276 ctatctcttaagcatcttagcattctctgagatactctgctttgattcaaaggaacatac 217
Query: 541 tttaaataagataatcacaaatacccacacatatatagatagatgtacattcatgtacac 600
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 tttgaataagataatcacaaatacccacacatatatagatagatgtacattcatgtacac 157
Query: 601 atacagatagacatatgtatacagat 626
||||||||||||||||||||| ||||
Sbjct: 156 atacagatagacatatgtatatagat 131
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1024
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1014
Effective search space: 624624
Effective search space used: 624624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
