Query= MSMg01no124_c12.b1 MSMg01no124_c12.b1 CHROMAT_FILE:
MSMg01no124_c12.b1 PHD_FILE: MSMg01no124_c12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:34:52 2005
(367 letters)
>mm_chr17_26953641_26954407
Length = 767
Score = 640 bits (331), Expect = 0.0
Identities = 346/351 (98%), Gaps = 1/351 (0%)
Strand = Plus / Minus
Query: 16 gaatt-catcagattagagctgacttccaagagttgtcctttgacctccatacatgaatc 74
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 gaattccatcagattagagctgacttccaagagttgtcctttgacctccatacatgaatc 707
Query: 75 cagactgagaattgaaaaattagaacacctggccaaggagggtgatcttgttcccatgtg 134
|||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 706 cagactgagaattgaaaagttagaacacctggccaaggagggtgatcttgttcctatgtg 647
Query: 135 acaagaactagagaagctgagctgccatctgattgggggcacccacactctaatttgcca 194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 acaagaactagagaagctgagctgccatctgattgggggcacccacactctaatttgcca 587
Query: 195 cagtcaccacgactccctgttgctttctggggtagtctggatcctaagtgctctgtagca 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 cagtcaccacgactccctgttgctttctggggtagtctggatcctaagtgctctgtagca 527
Query: 255 cagtgtggtgggatcttcaagaggcgatacctaataggaagctcggcagatttactctgc 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 cagtgtggtgggatcttcaagaggcgatacctaataggaagctcggcagatttactctgc 467
Query: 315 cgtgggccaccaacacaattcgatgctctgtcttacccaaagcactagatc 365
|||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 466 tgtgggccaccaacacaattcgatgctctgtctcacccaaagcactagatc 416
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 367
Length of database: 767
Length adjustment: 9
Effective length of query: 358
Effective length of database: 758
Effective search space: 271364
Effective search space used: 271364
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no124_c12.g1 MSMg01no124_c12.g1 CHROMAT_FILE:
MSMg01no124_c12.g1 PHD_FILE: MSMg01no124_c12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:34:52 2005
(379 letters)
>mm_chr17_26776574_26777353
Length = 780
Score = 592 bits (306), Expect = e-173
Identities = 365/400 (91%), Gaps = 28/400 (7%)
Strand = Plus / Plus
Query: 1 agcctggtctacagagtgagttccaggatagcc----cttgatacacagagaaaccctgt 56
||||||||||||||||||||||||||| |||| | ||||||||||||||||||
Sbjct: 188 agcctggtctacagagtgagttccaggccagccagggc----tacacagagaaaccctgt 243
Query: 57 ctcgaaccttccccctagtacccccccc----------------aaaaaaaa-aaagaaa 99
|| |||||||||||| |||||||||| |||||||| |||||||
Sbjct: 244 cttgaaccttccccc---taccccccccccaaaaagaaaaaagaaaaaaaaagaaagaaa 300
Query: 100 atagaagttcatttttctcatggattgggaaagaggaagtcaaagagatcaaccccagcc 159
||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atagaagttaatttatctcatggattgggaaagaggaagtcaaagagatcaaccccagcc 360
Query: 160 tgtggtgagccttcttgctgtgttgtccagtggagggcagggcatggagagacacaagca 219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgtggtgagccttcttgctgtgttgtccagtggagggcagggcatggagagacacaagca 420
Query: 220 tacaagcttagaagtgctttcctcttcttataggagagctaatgctaccattgacactta 279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaagcttagaagtgctttcctcttcttataggagagctaatgctaccattgacactta 480
Query: 280 cctcatggcctcatctaacctaatcacctcccagattaccacctccagtcaccaccaatg 339
|||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 481 cctcgtggcctcatctaacctaatcacctcccagattaccacctccagccaccaccaatg 540
Query: 340 taggcttacttccgggttcagccccttgatgtacacaaag 379
||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 taggcttacttccgggttcagccccttgatgtacacaaag 580
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 379
Length of database: 780
Length adjustment: 9
Effective length of query: 370
Effective length of database: 771
Effective search space: 285270
Effective search space used: 285270
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
