Query= MSMg01no125_b20.b1 MSMg01no125_b20.b1 CHROMAT_FILE:
MSMg01no125_b20.b1 PHD_FILE: MSMg01no125_b20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:37:03 2005
(685 letters)
>mm_chr17_64089786_64090870
Length = 1085
Score = 1199 bits (620), Expect = 0.0
Identities = 659/672 (98%)
Strand = Plus / Plus
Query: 11 tggggctggagcgatggctctgcagttaaaagcactggctacacttccagaggtcctgag 70
||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 211 tggggctggagagatggctctgcagttaagagcactggctacacttccagaggccctgag 270
Query: 71 ttcaattcccagaaactgaataggggcttacaaccatctttatggaatctgattccctct 130
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 ttcaattcccagaaactgagtaggggcttacaaccatctttatggaatctgattccctct 330
Query: 131 tctggcatgcatgaaaagagagagagatcctatacataaaataaaataaataaatctttt 190
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 331 tctggcatgcatgaaaagagagagagatcctatacataaaataaagtaaataaatctttt 390
Query: 191 taaaaattattctgacagtatctttgctgtgtaaatctcccatctgccctagttgccaga 250
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 aaaaaatcattctgacagtatctttgctgtgtaaatctcccatctgccctagttgccaga 450
Query: 251 cttgcagtctcctgtatctgtttaaattattcaaagtgcaacccgggaccaggtcctaga 310
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 451 cttgcagtctcctgtatctgtttaagttattcaaagtgcaacccgggaccaggtcctaga 510
Query: 311 agagagttagatatgacagtatatatgaaatgtgtacatctatgctctgtataggttagt 370
||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 511 agagagttaaatatgacagtatatatggaatgtgtacatctatgctctgtataggttagt 570
Query: 371 aaaatcttctatttatggcctgtggctctttgggcacgagccagagctggtcatactgca 430
|||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||
Sbjct: 571 aaaatcttctatttatggcccgtggctctttgggcatgagccagagctggtcatactgca 630
Query: 431 ctacttataaagacccttttctgagtgtgtggagtgaattatcactagggccctgttact 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 ctacttataaagacccttttctgagtgtgtggagtgaattatcactagggccctgttact 690
Query: 491 tgcctgcaccatgttgtcactaagcttccttcttctaacttataggaaaggatgtcattt 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 tgcctgcaccatgttgtcactaagcttccttcttctaacttataggaaaggatgtcattt 750
Query: 551 gctcttctaagttagctgaaaacacgagagaacttgagattgtgtgggagtatgttaaac 610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 gctcttctaagttagctgaaaacacgagagaacttgagattgtgtgggagtatgttaaac 810
Query: 611 aaaacactgaagcttggggacatgtcacctttgaagacagatgtgggagaaaggagttga 670
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811 aaaacactgaagcttggggacatgtcacctttgaagacagatgtgggagaaaggagttga 870
Query: 671 gaaaaatgaggc 682
|||||| |||||
Sbjct: 871 gaaaaacgaggc 882
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 685
Length of database: 1085
Length adjustment: 10
Effective length of query: 675
Effective length of database: 1075
Effective search space: 725625
Effective search space used: 725625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no125_b20.g1 MSMg01no125_b20.g1 CHROMAT_FILE:
MSMg01no125_b20.g1 PHD_FILE: MSMg01no125_b20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:37:03 2005
(645 letters)
>mm_chr17_64145240_64146283
Length = 1044
Score = 864 bits (447), Expect = 0.0
Identities = 480/491 (97%), Gaps = 1/491 (0%)
Strand = Plus / Minus
Query: 1 ctttggcaagattttccatatctctgaaattcacctgcctctactgtcagttcttgatat 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 490 ctttggcaagattttccatatctctgaaattcacctgcctctactgtcagctcttgatat 431
Query: 61 tgttcctattctcactgaaggaagtagggctttctttgcatgtctagcgctcaatagttc 120
|||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||
Sbjct: 430 tgttcctattctcactgaaggaagtagggccttc-ttgcatgtttagcgctcaatagttc 372
Query: 121 attaattaatgacccagggtttctcattatccctctccaggggctccacaaaccagtaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 attaattaatgacccagggtttctcattatccctctccaggggctccacaaaccagtaac 312
Query: 181 aatcatctaactctactgtaagagttgttaagtcattattttcaaacacctgagtcattt 240
||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 311 aatcatctaactccactgtaagagttgttaaatcattattttcaaacacctgagtcattt 252
Query: 241 cactgacaagaacacactttttcactggtagcttcctacgtcatcatgctatgtggtagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 cactgacaagaacacactttttcactggtagcttcctacgtcatcatgctatgtggtagt 192
Query: 301 tcgaatgagaatggcttccataggctcttatgtttgaatccttggtccccagctagtgga 360
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 191 tcgaatgagaatggcttccataggctcttatgtttgaatccttggtccctagctagtgga 132
Query: 361 actgtttgagaagggttaagaggtgtggccttgttggatgagatatgttactaagggtgg 420
|||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 131 actgtttgagaagggttaggaggtgtggccttgttggatgagatatgtcactaagggtgg 72
Query: 421 gctttgagtttcaaaagatcatgttaccctagcatctctctctgcctgcaactttcatat 480
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||
Sbjct: 71 gctttgagtttcaaaagatcatgttaccctagcatctctctttgcctgcaactttcagat 12
Query: 481 gagatgtggac 491
|||||||||||
Sbjct: 11 gagatgtggac 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1044
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1034
Effective search space: 656590
Effective search space used: 656590
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
