NCCCCCCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCCATATTCTTCCACGGTACTCCACAGTAGGAAAGAGCACTA
ACATTTTCATTAGATTATAATCACAGGGATTGGAGTGTTAATGCCAAGCA
TGCTCCATTCTTATATTTGAACTGAGTTGTGCCCCTGAGGCTCTTAATTC
AATGACATCTCTGTAAGGCAAATGCTTCTTTACTGAGACAATTCCCAAAC
TGCTCCAGGAGTTGATGGTAGAAAATGAATGATGTTGTAAAATTATTTGC
ATTTTCCAGCTCCCTGACTGAGCTTATTTGTTTGCTTGATTTGGAAATTT
AAAAAGTCATTTTCTCTTTGTAAGCAATTTTATAATTCTGTGTTTTTCCT
GGTTTTTTCAATTGATGAATCTCATCTACTAGAGCCACTAAAAATGTTCA
ATGAATTCCTTAGGGACCACTACCTGATGCAAAGTACCTCTTAAGAGGAG
CTCTTGTAGTCTAGGAGAAGGGCACCAAGAGCTACAGACCATTTAAGTCA
GGAATTAGCTGCAAATGGACTGATGCACTGGCAATTACCAAGAAAGGTTT
TAAATAATCCATTATGAAAAACAAACAGGGGGGTGAGGAGAGGGTGAGAG
TGCTTGCTGTGCATACATGAGGACCTAAGTTCAAATCTCCAGGTA

CGATGCTAGGTTAGCCTGGCGGCGCCTGGTTCAAACAAGAGGTGAACTAT
AGAAGGTTTCGAGAAAGCCTCAGAAAATTGTAAATCAATCTACCTGCAGA
CCCAGCTACACTACTTTTGAGAATTTCCCAAAAGATGTCCCACTATGCCA
CAGGGGCACATGTGCCACTATGTTCATAACGGCCTTATTTGTGATATCCA
GATGCTTGAAACAACCTAGATGTCCCAGGACAGAACAATGGATACAGAAA
ATTTGGTACATTTACACAATGGAATTCTACTTAGTTATTAAGAATGAGGA
CATCCTGAGTTTTGCTTATTATTGGATGTGACTAGAAAATATCATCCTGA
GTGAGGTAATTCACACCCAATAGGATGTGCATTGTATGCACTCACTAATA
AGTGAATATTAGCCAAAAAGGAACAAGAGTACAGAATACCCAACGCCGAA
GTTCACAAAACTCACCAAGGTCAACAAGTTGAAGTGCCCAAGTGAGGACA
CCTCATTCCCACTTGGGAGGGAGAAGAGAGCTATCACTATTCCACGCAGG
CGGACCCAGTTTTTTTTATCTGTGGACAACTCCTTTAGAAAAATCACCGC
TCCAACCCTGCCAGCTGACGGTGTATACCACACTATCCTCTGAACCTTCT
TCAAGCTTATTATTTGCACCCCACTGAGAGTACACACAACTATACCCCTT
GCGATCTTTTTG

Query= MSMg01no125_f06.b1 MSMg01no125_f06.b1 CHROMAT_FILE:
MSMg01no125_f06.b1 PHD_FILE: MSMg01no125_f06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:37:20 2005
         (640 letters)



>mm_chr17_82423064_82424100
          Length = 1037

 Score = 1191 bits (616), Expect = 0.0
 Identities = 630/636 (99%), Gaps = 3/636 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattccatattcttccacggtactccacagtaggaaagagcactaacattttcattaga 64
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 gaattccatattcttcaacggtactccacagtaggaaagagcactaacattttcattaga 716

                                                                       
Query: 65  ttataatcacagggattggagtgttaatgccaagcatgctccattcttatatttgaactg 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 ttataatcacagggattggagtgttaatgccaagcatgctccattcttatatttgaactg 656

                                                                       
Query: 125 agttgtgcccctgaggctcttaattcaatgacatctctgtaaggcaaatgcttctttact 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 agttgtgcccctgaggctcttaattcaatgacatctctgtaaggcaaatgcttctttact 596

                                                                       
Query: 185 gagacaattcccaaactgctccaggagttgatggtagaaaatgaatgatgttgtaaaatt 244
           |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 595 gagacaattcccaaactgctccagcagttgatggtagaaaatgagtgatgttgtaaaatt 536

                                                                       
Query: 245 atttgcattttccagctccctgactgagcttatttgtttgcttgatttggaaatttaaaa 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 atttgcattttccagctccctgactgagcttatttgtttgcttgatttggaaatttaaaa 476

                                                                       
Query: 305 agtcattttctctttgtaagcaattttataattctgtgtttttcctggttttttcaattg 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 agtcattttctctttgtaagcaattttataattctgtgtttttcctggttttttcaattg 416

                                                                       
Query: 365 atgaatctcatctactagagccactaaaaatgttcaatgaattccttagggaccactacc 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 atgaatctcatctactagagccactaaaaatgttcaatgaattccttagggaccactacc 356

                                                                       
Query: 425 tgatgcaaagtacctcttaagaggagctcttgtagtctaggagaagggcaccaagagcta 484
           ||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||
Sbjct: 355 tgatgcaaagtacctcttaagaggagctcttgtagtct---agaagggcaccaagagcta 299

                                                                       
Query: 485 cagaccatttaagtcaggaattagctgcaaatggactgatgcactggcaattaccaagaa 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 cagaccatttaagtcaggaattagctgcaaatggactgatgcactggcaattaccaagaa 239

                                                                       
Query: 545 aggttttaaataatccattatgaaaaacaaacaggggggtgaggagagggtgagagtgct 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 aggttttaaataatccattatgaaaaacaaacaggggggtgaggagagggtgagagtgct 179

                                               
Query: 605 tgctgtgcatacatgaggacctaagttcaaatctcc 640
           ||||||||||||||||||||||||||||||||||||
Sbjct: 178 tgctgtgcatacatgaggacctaagttcaaatctcc 143


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 640
Length of database: 1037
Length adjustment: 10
Effective length of query: 630
Effective length of database: 1027
Effective search space:   647010
Effective search space used:   647010
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)