Query= MSMg01no126_a16.b1 MSMg01no126_a16.b1 CHROMAT_FILE:
MSMg01no126_a16.b1 PHD_FILE: MSMg01no126_a16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:38:16 2005
(299 letters)
>mm_chr17_79796506_79797204
Length = 699
Score = 578 bits (299), Expect = e-169
Identities = 299/299 (100%)
Strand = Plus / Plus
Query: 1 ttacttagcccttccgcttataggtactatcatatacacactctttccaggtcttctgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttacttagcccttccgcttataggtactatcatatacacactctttccaggtcttctgta 260
Query: 61 gtagtaagatttccttattgtctgaccaaatacctaaagaaacaagacagcaaacatttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtagtaagatttccttattgtctgaccaaatacctaaagaaacaagacagcaaacatttg 320
Query: 121 gtttgtctccttgcttcagaggtaccagactatggtagcagacagggtatggggggggaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtttgtctccttgcttcagaggtaccagactatggtagcagacagggtatggggggggaa 380
Query: 181 gagcaggttataccatggtgccatgaagctgagcagaggagaatggttgtactaaacgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gagcaggttataccatggtgccatgaagctgagcagaggagaatggttgtactaaacgtg 440
Query: 241 ttctctcatcccttctatcttaagtttatgattgctgtgatgaaacaccatgagaaaag 299
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttctctcatcccttctatcttaagtttatgattgctgtgatgaaacaccatgagaaaag 499
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 299
Length of database: 699
Length adjustment: 9
Effective length of query: 290
Effective length of database: 690
Effective search space: 200100
Effective search space used: 200100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no126_a16.g1 MSMg01no126_a16.g1 CHROMAT_FILE:
MSMg01no126_a16.g1 PHD_FILE: MSMg01no126_a16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:38:16 2005
(346 letters)
>mm_chr17_79951691_79952437
Length = 747
Score = 580 bits (300), Expect = e-170
Identities = 333/344 (96%), Gaps = 1/344 (0%)
Strand = Plus / Minus
Query: 1 acttggatgtttgggttgcttccgtgtgcaaactgggaaccacaacagtacaaaatcagc 60
||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 544 acttggatgtttgggttgcttccatgtacaaactgggaaccacaacagtacaaaatcagc 485
Query: 61 tctagccatgtgtatgaaatattccacaatatgtgcatgaatgcatatacacatgtattg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 tctagccatgtgtatgaaatattccacaatatgtgcatgaatgcatatacacatgtattg 425
Query: 121 tattagctataataatggcttgttccaggacaaggctaatggggacaggaagtaggtata 180
||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 424 tattaactataataatggcttgttccaggacaaggctaatggggacaggaagtagatata 365
Query: 181 ggatcttcttggttggctgaatgaggaagagtcaaacatctcactctcatcttaccctgt 240
|||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||
Sbjct: 364 ggatcttcttggttggctgaatgaggaaaagtcaaacatctcaccctcatcttaccctgt 305
Query: 241 taatactatttttaaacaaattaacttgaagagacctaaggcattttggccatgttttat 300
||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 304 taatactctttttaaacaaattaacttgaagagacctaaggcgttttgaccatgttttat 245
Query: 301 aaacaagaaaaa-tgtccatgctcatttacaggtggagaaaatg 343
|||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 244 aaacaaaaaaaaatgtccatgctcatttacaggtggagaaaatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 346
Length of database: 747
Length adjustment: 9
Effective length of query: 337
Effective length of database: 738
Effective search space: 248706
Effective search space used: 248706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
