Query= MSMg01no126_n24.b1 MSMg01no126_n24.b1 CHROMAT_FILE:
MSMg01no126_n24.b1 PHD_FILE: MSMg01no126_n24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:39:25 2005
(374 letters)
>mm_chr17_29142057_29142830
Length = 774
Score = 679 bits (351), Expect = 0.0
Identities = 366/371 (98%), Gaps = 1/371 (0%)
Strand = Plus / Plus
Query: 3 gaattccaggatagtcacacgctatatagtgagaatctatcttgaaagaactaaaaggtc 62
|||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattccaggatagccaga-gctatatagtgagaatctatcttgaaagaactaaaaggtc 262
Query: 63 aatgggatattatgtgcgctcgcagatgtcaaatataacaggccagcagaatccttttat 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 aatgggatattatgtgcgctcgcagatgtcaaatataacaggccagcagaatccttttat 322
Query: 123 tcttcagccagtacctaatgcaatgctaagcactgggctctccttcccaggctcactatg 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tcttcagccagtacctaatgcaatgctaagcactgggctctccttcccaggctcactatg 382
Query: 183 taggcaaggtggcctccacctcagatcaacccgcctttgctacccagtgccccagtggcc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 taggcaaggtggcctccacctcagatcaacccgcctttgctacccagtgccccagtggcc 442
Query: 243 caccacacccagcccttttgacctttgttcaagcccttctctcttcctccactcataaaa 302
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 443 caccacacccagcccttttgacctttgttcaagcccttctctctacctccactcataaaa 502
Query: 303 ggtttagcctaattctaataacctctaatcaaaagatccaattaatattgctcaatagta 362
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 503 ggtttagcctaattctaataacctctaatcaaaagatccaattaatattgctcaatagca 562
Query: 363 atttacgggtt 373
|||||||||||
Sbjct: 563 atttacgggtt 573
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 374
Length of database: 774
Length adjustment: 9
Effective length of query: 365
Effective length of database: 765
Effective search space: 279225
Effective search space used: 279225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no126_n24.g1 MSMg01no126_n24.g1 CHROMAT_FILE:
MSMg01no126_n24.g1 PHD_FILE: MSMg01no126_n24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:39:25 2005
(104 letters)
>mm_chr17_29293685_29294188
Length = 504
Score = 178 bits (92), Expect = 8e-50
Identities = 101/104 (97%)
Strand = Plus / Minus
Query: 1 attccaggcctgcgcagaggtcagaggcacttggctcagtccccagtgtctccctctggg 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 attccaggcctgtgcagaggtcagaggcacttggctcagtccccagtgtctccctctggg 245
Query: 61 ctaaatcagccaccacatagtagcaatgccagtcagcttgaagg 104
||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 244 ctaaatcagccaccacaaagtagcaatgccagccagcttgaagg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 104
Length of database: 504
Length adjustment: 8
Effective length of query: 96
Effective length of database: 496
Effective search space: 47616
Effective search space used: 47616
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
|
