Query= MSMg01no127_g02.b1 MSMg01no127_g02.b1 CHROMAT_FILE:
MSMg01no127_g02.b1 PHD_FILE: MSMg01no127_g02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:40:06 2005
(647 letters)
>mm_chr17_20876558_20877604
Length = 1047
Score = 1027 bits (531), Expect = 0.0
Identities = 608/645 (94%), Gaps = 22/645 (3%)
Strand = Plus / Plus
Query: 5 gaattccttgcaacaccaatcaagtcaggcaccaataaaaccatatattatgttcaccat 64
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccttgcaacaggaatcaagtcaggcaccaataaaaccatatattatgttcaccat 264
Query: 65 gagaattaagaataagaaaattattgttaggtggctaattgacacagaaaattatgtcaa 124
||||||| |||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 265 gagaattgagaataagaaaattattgttaggtggctaattgacacagaaagtgatgtca- 323
Query: 125 tatatatacagaactgcaagacactataccaagtatggaaaaaa-taattatactaggag 183
||||| |||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 324 ----------gaactacaagacactataccaagtatggaaaaaaataattatactaggag 373
Query: 184 tggcagaagaaatctatagtacctgtatgtaagttggaattaatggtatttgaccaaata 243
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 374 tggcagaagaaatctatagtacctgtatgtaagttggaattaatggcatttgaccaaata 433
Query: 244 attcccttagattttgcatattgcagtgaaccagaaaatattttaggtttcctaacactt 303
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 attcccttggattttgcatattgcagtgaaccagaaaatattttaggtttcctaacactt 493
Query: 304 ttaaaaaggtttcctgatttactaaatgttaaaaagattgaaaaattaaaatataatcta 363
|||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 494 ttaaaaaggtttcctgatttactaaatgttaaaaagattgcaaaattaaaatgtaatcta 553
Query: 364 gtagaaggaaaatagagtatataaggctatcaacaattaaaacttcctttatgccacaca 423
|||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 554 gtagaatgaaaatagagtatataaggctatcaacaattaaaacttcctttatgcgacaca 613
Query: 424 cacaattaaaggagaaaacgaggaaaa-gaggaaatatctgaaaccattgaaactctact 482
||||||||| ||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 614 aacaattaaa--aga-------gaaaatgaggaaatatctgaaaccattgaaactctact 664
Query: 483 aaagtaaggagtaattgaaccaactcaaagcttcaaattcaacagtgtaatttggccatt 542
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 665 aaagtaaggagtaattgaaccaactcaaagcttcaaattcaacagtgcaatttggccatt 724
Query: 543 tttaaaaccaaatggtaaaaggtgactgacagtagattataggaaaattaattaattgtc 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 tttaaaaccaaatggtaaaaggtgactgacagtagattataggaaaattaattaattgtc 784
Query: 603 cataaaacttccagaacaattaccatattttcatgaggattaaga 647
||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 catgaaacttccagaacaattaccatattttcatgaggattaaga 829
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1047
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1037
Effective search space: 660569
Effective search space used: 660569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no127_g02.g1 MSMg01no127_g02.g1 CHROMAT_FILE:
MSMg01no127_g02.g1 PHD_FILE: MSMg01no127_g02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:40:06 2005
(488 letters)
>mm_chr17_21008596_21009483
Length = 888
Score = 663 bits (343), Expect = 0.0
Identities = 346/347 (99%)
Strand = Plus / Minus
Query: 1 atcctctgtaactcaccaataacattttcgaaccaaagtgatatcagactaactgaaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 atcctctgtaactcaccaataacattttcgaaccaaagtgatatcagactaactgaaaga 288
Query: 61 aacacagatatgaagtagataacattcccatacatttaaagggaaaattgattaaggtta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 aacacagatatgaagtagataacattcccatacatttaaagggaaaattgattaaggtta 228
Query: 121 tatttaaagcataagataaaatccatttatatatatatatataaaatgtatatatataaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 tatttaaagcataagataaaatccatttatatatatatatataaaatgtatatatataaa 168
Query: 181 ttcagatggaatagcaaaatatcagagggagctctgtaggtttagatttttgaataacta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 ttcagatggaatagcaaaatatcagagggagctctgtaggtttagatttttgaataacta 108
Query: 241 ctttttaataaggcttctcaagtgctttgactccattttagcctaatgtctaaaggtagg 300
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 107 ctttttaataaggcttctcaagtgctttgactccattttagcctaatgtccaaaggtagg 48
Query: 301 gagaaaagatagtaaatgagacaagggaaagtagacttgtttagaag 347
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47 gagaaaagatagtaaatgagacaagggaaagtagacttgtttagaag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 488
Length of database: 888
Length adjustment: 10
Effective length of query: 478
Effective length of database: 878
Effective search space: 419684
Effective search space used: 419684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
