Query= MSMg01no129_o21.b1 MSMg01no129_o21.b1 CHROMAT_FILE:
MSMg01no129_o21.b1 PHD_FILE: MSMg01no129_o21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:43:30 2005
(456 letters)
>mm_chr17_28198830_28199685
Length = 856
Score = 803 bits (415), Expect = 0.0
Identities = 445/455 (97%), Gaps = 2/455 (0%)
Strand = Plus / Minus
Query: 1 aaacaaagattaaataacatttttcttacaatccagtcccactgtccaccatgaccagta 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 654 aaacaaagattaaataacatttttcttacaatccagtcccactgtccaccatgagcagta 595
Query: 61 actcccatgacctgcggcgctggtcccggcacctcacaagctaactgtgaactgtcttga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 actcccatgacctgcggcgctggtcccggcacctcacaagctaactgtgaactgtcttga 535
Query: 121 tgattgcagccatgtgttctgagtgctcaaacccaaggtttctcataaccccccagtggg 180
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 534 tgattgcagccatgtgttctgagtgctcaaacccaaggtttctcagaaccccccagtggg 475
Query: 181 caacctcagagtccaaagtcccctgctgggacacagggcctgcagggcagcaggccagcc 240
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 474 caacctcagagtccaaagtcccctgctgggacacagggcctgcagggcggcaggccagcc 415
Query: 241 aagaggcaagcaaggtatcctgtggccactgcatgagggactgggcacgtcttgccattc 300
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 aagaggcaagcaagggatcctgtggccactgcatgagggactgggcacgtcttgccattc 355
Query: 301 ccaccagaacggctccttcacagttcaggcacagccttggtttcacacccccgccaaagg 360
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 354 ccaccagaacggctccttcacagttcaggcacagccttggtttcacacaagcgccaaagg 295
Query: 361 cagagccttccatgtggcacttgtcctgaaaaggagagacccacccggaggaggagaaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 294 cagagccttccatgtggcacttgtcctgaaaaggagagacccacccggaggaggagagga 235
Query: 421 atttcttgaac-attcagaaaccaatcttgaaagg 454
|||||||| || |||||||||||||||||||||||
Sbjct: 234 atttcttg-actattcagaaaccaatcttgaaagg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 456
Length of database: 856
Length adjustment: 10
Effective length of query: 446
Effective length of database: 846
Effective search space: 377316
Effective search space used: 377316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no129_o21.g1 MSMg01no129_o21.g1 CHROMAT_FILE:
MSMg01no129_o21.g1 PHD_FILE: MSMg01no129_o21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:43:30 2005
(593 letters)
>mm_chr17_28046631_28047623
Length = 993
Score = 1085 bits (561), Expect = 0.0
Identities = 585/593 (98%)
Strand = Plus / Plus
Query: 1 cggaatccctctcacatcctgcagggactcccacgccgtgcagagcctcgcgactcccct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cggaatccctctcacatcctgcagggactcccacgccgtgcagagcctcgcgactcccct 260
Query: 61 agagcacattctcggcttccttacccaacgagcttagaacgttccaccgggctgtgcgga 120
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 261 agagcacattctcggcttccttccccaacgagcttagaacgttccaccgggctgtgcgga 320
Query: 121 acccggcttttgtttgtttttaaaattgcttctgcattgatcgcgcacgaggtgttcagt 180
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 321 acccggcttttgtttgtttttaaaattgcttctgcattgatcacgcacgaggtgttcaga 380
Query: 181 ctttgagcccctcttgcgcttgaagctcagtttgtcgttgtcactttggttgggttcgtc 240
||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 381 ctttgagcccctcttgcgcctgaagctcagtttgtcgttgtcactttggctgggttcgtc 440
Query: 241 caagtggcatctgctcatttcccccctgagacttaatcggaaagaaaccaaggcttgctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caagtggcatctgctcatttcccccctgagacttaatcggaaagaaaccaaggcttgctc 500
Query: 301 agggagctgaggtgcgttcaactttctgagatcttttagacacccgaatcccgggctgca 360
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 501 agggagctgaggtgcgttcaactttctgagatcttttagacacttgaatcccgggctgca 560
Query: 361 aggcttcgggagggaggggtcactctttgtagcttacaagagggagggaggattagaatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aggcttcgggagggaggggtcactctttgtagcttacaagagggagggaggattagaatg 620
Query: 421 ctctgtcagagtgcataaaatgtgttggttcagcaatgctttcttagctgttttcttttc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctctgtcagagtgcataaaatgtgttggttcagcaatgctttcttagctgttttcttttc 680
Query: 481 cttccttgttttgaggcttttgagaagtggaagttcatttagaagtggtttccttagctt 540
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 681 cttccttgttttgaggcttttgagaagtggaagttcatttagaagtggttttcttagctt 740
Query: 541 ctgttccttataggttcatgcactttcagtttgagtgagtttggagagcttgg 593
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ctgttccttataggttcatgcactttcagtttgagtgagtttggagagcttgg 793
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 593
Length of database: 993
Length adjustment: 10
Effective length of query: 583
Effective length of database: 983
Effective search space: 573089
Effective search space used: 573089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
