Query= MSMg01no130_b12.b1 MSMg01no130_b12.b1 CHROMAT_FILE:
MSMg01no130_b12.b1 PHD_FILE: MSMg01no130_b12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:43:44 2005
(595 letters)
>mm_chr17_27606478_27607472
Length = 995
Score = 1052 bits (544), Expect = 0.0
Identities = 575/586 (98%), Gaps = 2/586 (0%)
Strand = Plus / Minus
Query: 5 gaattcaggagaagtgcgggccctgcctcatggcctcctcgcaatcccagaaccccaaca 64
|||||||||||||| | ||||||||||| ||||||||||||||||||||||||||| |||
Sbjct: 586 gaattcaggagaagagggggccctgcctaatggcctcctcgcaatcccagaacccccaca 527
Query: 65 ggttgccctgagccctcccattcagtgtctggggcctgacactgcccttggatcactatg 124
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 ggctgccctgagccctcccattcagtgtctggggcctgacactgcccttggatcactatg 467
Query: 125 agtggccctgctgagtgatgaggcccaccaggccccagctggtatccttgccaggatggg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 agtggccctgctgagtgatgaggcccaccaggccccagctggtatccttgccaggatggg 407
Query: 185 gattggcaaggtgttggcatcaatgtgactgcttgtgatggccaggtcaatcctgtgtga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 gattggcaaggtgttggcatcaatgtgactgcttgtgatggccaggtcaatcctgtgtga 347
Query: 245 cgaagatgaactcccatgctcgcgtggcccgcctcggggactttgcctgtctgctctgat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 cgaagatgaactcccatgctcgcgtggcccgcctcggggactttgcctgtctgctctgat 287
Query: 305 ttctctgatgctctggcctgtgggagggtgttgacacctctcaggtcagtgagtccctag 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 ttctctgatgctctggcctgtgggagggtgttgacacctctcaggtcagtgagtccctag 227
Query: 365 ggctagatgccgtgaggcactggtgtgtgtgt--atgtgtgtgaatatgtatgtgtgaat 422
||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 226 ggctagatgtcgtgaggcactggtgtgtgtgtgtatgtgtgtgaatatgtatgtgtgaat 167
Query: 423 gcatgtgcttgagtgggtgtgtatgtgtgtgtgttcatgcatgtttgcatgtgtgtgtgc 482
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 166 gcatgtgcttgagtgggtgtgtatgtgtgtgtgttcatgcatgtttgtatgtgtgtgtgc 107
Query: 483 gtgtgcgtgcatgtgtgcgtgtgtatgtgtgtacaggtgcatgtaccggtgtgtgtgtgc 542
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 gtgtgcgtacatgtgtgcgtgtgtatgtgtgtacaggtgcatgtaccggtgtgtgtgtgc 47
Query: 543 ttgagtaaatgtgtatgtgcatgcgtgtgttaatgcatgtttgtgt 588
||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 46 ttgagtaaatgtgtatgtgcatgtgtgtgttaatgcatgtttgtgt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 595
Length of database: 995
Length adjustment: 10
Effective length of query: 585
Effective length of database: 985
Effective search space: 576225
Effective search space used: 576225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no130_b12.g1 MSMg01no130_b12.g1 CHROMAT_FILE:
MSMg01no130_b12.g1 PHD_FILE: MSMg01no130_b12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:43:44 2005
(343 letters)
>mm_chr17_27517077_27517819
Length = 743
Score = 652 bits (337), Expect = 0.0
Identities = 340/341 (99%), Gaps = 1/341 (0%)
Strand = Plus / Plus
Query: 1 tcctcagacatgacttctcctggaaggagagttcaattcctctgtggagttctgtgttgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcctcagacatgacttctcctggaaggagagttcaattcctctgtggagttctgtgttgg 260
Query: 61 agagagcctagctggccaggcagcatgacccacagaggaggaaggtcagctgagaggtga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agagagcctagctggccaggcagcatgacccacagaggaggaaggtcagctgagaggtga 320
Query: 121 gtaggagccccagaccatgcaaactagcagtacccagccaggacagctcggacactcacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtaggagccccagaccatgcaaactagcagtacccagccaggacagctcggacactcacc 380
Query: 181 tgggatgtggcgacgtcagctgcttgagacttttccctttaagattttgtatcttaaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgggatgtggcgacgtcagctgcttgagacttttccctttaagattttgtatcttaaaaa 440
Query: 241 aaaaaaaaataaaaaagattttgtatcttatgggcctgtgtatatagctaggggtgggcc 300
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaaaaaaa-aaaaaagattttgtatcttatgggcctgtgtatatagctaggggtgggcc 499
Query: 301 tgtgtatatagctaggggtggggtgtgtgtgtgtgtgtgtg 341
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tgtgtatatagctaggggtggggtgtgtgtgtgtgtgtgtg 540
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 743
Length adjustment: 9
Effective length of query: 334
Effective length of database: 734
Effective search space: 245156
Effective search space used: 245156
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
