Query= MSMg01no130_h11.b1 MSMg01no130_h11.b1 CHROMAT_FILE:
MSMg01no130_h11.b1 PHD_FILE: MSMg01no130_h11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:44:16 2005
(342 letters)
>mm_chr17_44840259_44841000
Length = 742
Score = 661 bits (342), Expect = 0.0
Identities = 342/342 (100%)
Strand = Plus / Minus
Query: 1 agatcccgttctaagcaatcctttgtgtgcttgggacaggcagcaataatgccacctttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 agatcccgttctaagcaatcctttgtgtgcttgggacaggcagcaataatgccacctttc 483
Query: 61 tgcttctaaaaaaatcaaaggcctgatttctgtttcccattacggttctgaggctcagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 tgcttctaaaaaaatcaaaggcctgatttctgtttcccattacggttctgaggctcagaa 423
Query: 121 tcacaggggtttgtggacataaatgatgagggtaatttgtcttgcttcagtggccattag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tcacaggggtttgtggacataaatgatgagggtaatttgtcttgcttcagtggccattag 363
Query: 181 aatctttaattgagaaaaatatgacccaaaagaggaacaggtctgccatgtgataaaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 aatctttaattgagaaaaatatgacccaaaagaggaacaggtctgccatgtgataaaaaa 303
Query: 241 aaatcactattaataaccagagaagatccattgtgaggaatttaggactccgggtgagaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 aaatcactattaataaccagagaagatccattgtgaggaatttaggactccgggtgagaa 243
Query: 301 tggtctcttggcagaaactcttgggtttatttgatctgtgtg 342
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tggtctcttggcagaaactcttgggtttatttgatctgtgtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 742
Length adjustment: 9
Effective length of query: 333
Effective length of database: 733
Effective search space: 244089
Effective search space used: 244089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no130_h11.g1 MSMg01no130_h11.g1 CHROMAT_FILE:
MSMg01no130_h11.g1 PHD_FILE: MSMg01no130_h11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:44:16 2005
(329 letters)
>mm_chr17_44744999_44745727
Length = 729
Score = 617 bits (319), Expect = 0.0
Identities = 326/329 (99%), Gaps = 2/329 (0%)
Strand = Plus / Plus
Query: 1 gcctgacgtgactggcggggtgtaggtaaaggtggctgggtagtgcattcgtgggttgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gcctgacgtgactggcggggtgtaggtaaaggtggctgggtagtgcattcgtgggttgga 260
Query: 61 gaagcggctctcagtgagggatgaaatgcttgggaactgcctggggtctgaaaaagggcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaagcggctctcagtgagggatgaaatgcttgggaactgcctggggtctgaaaaagggcc 320
Query: 121 cagttctgaagcacctaaaaattacaacagaagatggggagggaaacatctgtaaatatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagttctgaagcacctaaaaattacaacagaagatggggagggaaacatctgtaaatatc 380
Query: 181 aattaaaatgatagaaatgttacaaaattaaaaaaaaaaaattaaaaggaagatgaggaa 240
||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||
Sbjct: 381 aattaaaatgatagaaacgttacaaaattaaaaaaaaaa--ttaaaaggaagatgaggaa 438
Query: 241 aacttagctttctcccaaggcacagcaagtcacacacagatttcaaatgcactgctcaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 aacttagctttctcccaaggcacagcaagtcacacacagatttcaaatgcactgctcaac 498
Query: 301 tcagggtctttacttgtttaccttacagt 329
|||||||||||||||||||||||||||||
Sbjct: 499 tcagggtctttacttgtttaccttacagt 527
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 329
Length of database: 729
Length adjustment: 9
Effective length of query: 320
Effective length of database: 720
Effective search space: 230400
Effective search space used: 230400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
