Query= MSMg01no130_j20.b1 MSMg01no130_j20.b1 CHROMAT_FILE:
MSMg01no130_j20.b1 PHD_FILE: MSMg01no130_j20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:44:29 2005
(338 letters)
>mm_chr17_78149666_78150403
Length = 738
Score = 629 bits (325), Expect = 0.0
Identities = 334/337 (99%)
Strand = Plus / Minus
Query: 2 tcttacccactgagccatctcaccagccccttaactcttattaaactgtaatacaatgtg 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 tcttacccactgagccatctcaccagccccttaactcttattaaactgtaatacaatgtg 509
Query: 62 aattcaggcacatgacgattaaacccactgtcaatatatatttgtttgttgatttgccta 121
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 508 aattcaggcacatgacgattaaacccactgtcaatatatatttgttcgttgatttgccta 449
Query: 122 gtagaagttagagaggtgtataaataataaggggaagaaatctgtgtgtccttatcagag 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 gtagaagttagagaggtgtataaataataaggggaagaaatctgtgtgtccttatcagag 389
Query: 182 ctgtattggtatagtttatgctgagttcacacattggtacacctactccaggatttgact 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 ctgtattggtatagtttatgctgagttcacacattggtacacctactccaggatttgact 329
Query: 242 gtcagtaatagactctccttctagagtctagaagttcacgaccctgtgagaaaatcacaa 301
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 328 gtcagtaatagactctccttctagagtctagaagttcacgaccctgggagaaaatcacta 269
Query: 302 caaaataaagagcaatgtcatgaggagatattccctg 338
|||||||||||||||||||||||||||||||||||||
Sbjct: 268 caaaataaagagcaatgtcatgaggagatattccctg 232
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 738
Length adjustment: 9
Effective length of query: 329
Effective length of database: 729
Effective search space: 239841
Effective search space used: 239841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no130_j20.g1 MSMg01no130_j20.g1 CHROMAT_FILE:
MSMg01no130_j20.g1 PHD_FILE: MSMg01no130_j20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:44:29 2005
(293 letters)
>mm_chr17_78012102_78012792
Length = 691
Score = 493 bits (255), Expect = e-144
Identities = 283/293 (96%), Gaps = 2/293 (0%)
Strand = Plus / Plus
Query: 1 aaaggcttgatgaaaaattaatttttttgctcttactctagtgaacagaatccctaggga 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 aaaggcttgatgaaaaattaatttttttgctcttactctagtgaacagaattcctaggga 260
Query: 61 actcggaaggaacaaataaatactcttcttaaagaatatatgttctgcttacaaaatcct 120
|||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |||
Sbjct: 261 actctgaaggaacaaataaatactcttcttaaaga--atatgttctgcttacaaaagcct 318
Query: 121 cttcccaacctagtgctaaaagaaaggtgtacacctggagacaaaggaaaatcttgtcag 180
|||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 319 cttctcaacctagtgctaaaagaaaggtgtacacctggagacaaaggaaaatcctgtcag 378
Query: 181 aaaaacagtgacatgtctcttcatgtgtcaataactgggccatttccatgctgaggatcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 aaaaacagtgacatgtctcttcatgtgtcaataactgggccatttccatgctgaggatcc 438
Query: 241 acagcctaaggttgcttagtgcttgaagcagctactttcccttcatttgttct 293
||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 439 acagcctaagggggcttagtgcttgaagcagctactctcccttcatttgttct 491
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 691
Length adjustment: 9
Effective length of query: 284
Effective length of database: 682
Effective search space: 193688
Effective search space used: 193688
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
