Query= MSMg01no131_e20.b1 MSMg01no131_e20.b1 CHROMAT_FILE:
MSMg01no131_e20.b1 PHD_FILE: MSMg01no131_e20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:45:28 2005
(244 letters)
>mm_chr17_86711296_86711939
Length = 644
Score = 406 bits (210), Expect = e-118
Identities = 231/238 (97%)
Strand = Plus / Minus
Query: 4 tttgattgtacttagatgtccaaagcaagcacgtaagcacaaagctgcctcttctaatat 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 441 tttgattgtacttagatgtccaaagcaagcacgtaagcacaaagctgcctcttctaacat 382
Query: 64 tatccgaacaatcaaccacctgattcccaccgaggctcctcgtgggtgacataacaccag 123
| || ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct: 381 tgtctgaacaatcaaccacccgattcccaccgaggttcctcgtgggtgacataacaccag 322
Query: 124 ccaacatctgatcacctcatcattcaaaagctgaggagacaacagcatcaccttctatcc 183
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccaacatctgatcatctcatcattcaaaagctgaggagacaacagcatcaccttctatcc 262
Query: 184 aaacagagacgtgctcttcaacctatgattaaaaccgttgggtaataggcaaaattat 241
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 261 aaacagagacgtgctcttcaacctatgattaaaaccgttgggtaataggcaagattat 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no131_e20.g1 MSMg01no131_e20.g1 CHROMAT_FILE:
MSMg01no131_e20.g1 PHD_FILE: MSMg01no131_e20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:45:28 2005
(334 letters)
>mm_chr17_86576841_86577574
Length = 734
Score = 594 bits (307), Expect = e-174
Identities = 328/335 (97%), Gaps = 2/335 (0%)
Strand = Plus / Plus
Query: 1 acctacatacaaacaaaatagaaactccagagggaacaggtttggactcagacctgccca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acctacatacaaacaaaatagaaactccagagggaacaggtttggactcagacctgccca 260
Query: 61 gaggagaaactcaagcctgccaccaaaccccagtgctgcagtgtcctccagcctgcccgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaggagaaactcaagcctgccaccaaaccccagtgctgcagtgtcctccagcctgcccgt 320
Query: 121 cttcccatcctctccttgaagtcttctggaggtcacctttaagtcagctgtggtgctgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttcccatcctctccttgaagtcttctggaggtcacctttaagtcagctgtggtgctgct 380
Query: 181 tgcctgtcaccccagccgaaatgg-ccagagtagaggagggcactccctgtgctcgtatc 239
|||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 381 tgcctgtcaccccagccgaaatggaccagaggagaggagggcactccctgtgctcgtatc 440
Query: 240 tgggaagcatttaatgccaaaaaatgtggccaactcaagaggggttggaaacaatatagt 299
|||||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||
Sbjct: 441 tgggaagcatttaaggccaaaaa-tgtggccaacacaagaggggttggaaacaatatagt 499
Query: 300 gggtgaatatagaattgattattgggaggtggcag 334
|||||||||||||||||||||||||| ||| ||||
Sbjct: 500 gggtgaatatagaattgattattggggggtagcag 534
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 334
Length of database: 734
Length adjustment: 9
Effective length of query: 325
Effective length of database: 725
Effective search space: 235625
Effective search space used: 235625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
