Query= MSMg01no135_n02.b1 MSMg01no135_n02.b1 CHROMAT_FILE:
MSMg01no135_n02.b1 PHD_FILE: MSMg01no135_n02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:01 2005
(530 letters)
>mm_chr17_70078068_70078997
Length = 930
Score = 656 bits (339), Expect = 0.0
Identities = 351/355 (98%)
Strand = Plus / Minus
Query: 172 tctgttttctgtttccagtacacaggaaagggtagggtgtgactccttgtacttgtaaca 231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 930 tctgttttctgtttccagtacacaggaaagggtagggtgtgactccttgtacttgtaaca 871
Query: 232 ctagcactacaagaaacagaaacaagagtatccctggagcttgctggaagctacctcatc 291
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 870 ctagcactacaagaaacagaaacaagagtatccctggagcttgctggaagctacctcacc 811
Query: 292 ctcaaactcagaagagcaacgctgtttcaaagtaataaggtacaaaactatataaaagga 351
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 810 ctcaaactcagaagagcaatgctgtttcaaagtaataaggtacaaaactatataaaagga 751
Query: 352 cacctgactccctcctctggcctctgcttatgtgcaaatatgcatattttccactgaagc 411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 cacctgactccctcctctggcctctgcttatgtgcaaatatgcatattttccactgaagc 691
Query: 412 caaatggtttagtcaatataaccatggcttgtgttcatcgtaggctggcttttcctatag 471
||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 690 caaatggtttagtcaatataaccatggctagggttcatcgtaggctggcttttcctatag 631
Query: 472 atgtatatagatctctttcttcactgagctacaagaggtttcattagcctatgtc 526
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 atgtatatagatctctttcttcactgagctacaagaggtttcattagcctatgtc 576
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 530
Length of database: 930
Length adjustment: 10
Effective length of query: 520
Effective length of database: 920
Effective search space: 478400
Effective search space used: 478400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no135_n02.g1 MSMg01no135_n02.g1 CHROMAT_FILE:
MSMg01no135_n02.g1 PHD_FILE: MSMg01no135_n02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:01 2005
(625 letters)
>mm_chr17_69907629_69908654
Length = 1026
Score = 1093 bits (565), Expect = 0.0
Identities = 610/625 (97%), Gaps = 3/625 (0%)
Strand = Plus / Plus
Query: 1 ctgcacaaaacatcatgaccaagaagcaagttgggaggaaagggtttactcagcttacac 60
|||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 203 ctgcacaaaacatcatgaccaagaagcaag-tgggaggaaagggtttattcagcttacac 261
Query: 61 ttccacattgttgttcatcaccaaaggaagccaggacaggaactcacacagggcaggaac 120
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ttccacattgctgttcatcaccaaaggaagccaggacaggaactcacacagggcaggaac 321
Query: 121 ctggcagcagaagctgatgcagaagccatggaggagtgctgcttactggcttgcttcccc 180
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 322 ctggcagcagaagctgatgcagaagccatggaggggtgctgcttactggcttgcttcccc 381
Query: 181 ttgcttgctcagcttgctttcttatagaacccaagactaccagcccagggatagcaccac 240
| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 382 tggcttgctcagcttgctttcttatagaacccaagactaccagcccagggagagcaccac 441
Query: 241 ccacaatgggctcttcccccttgatcactaattgagaaaatgcctgaccgctggatctca 300
|||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 442 ccacaatggggtcttcccccttgatcactaattgagaaaatgcctgaccgctg-atctca 500
Query: 301 tggaggcatttcctcaagagaggctcctttctctgtgataactccagcttgtgtccagtt 360
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 501 tggaggcatttcctcaagagaggctactttctctgtgataactccagcttgtgtccagtt 560
Query: 361 gacacacaaaaccagccagtatatacagtcagctccaatctactcaacatta-gagatta 419
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 561 gacacacaaaaccagccagtatatacagtcagctccaatctactcaacattaagagatga 620
Query: 420 aggagcctggtcgagatgaacttgatcaggtgctatagagtagaggctgaagtcaacata 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aggagcctggtcgagatgaacttgatcaggtgctatagagtagaggctgaagtcaacata 680
Query: 480 gccaagggatgccatccacgttccacagagcacatgtttctgttgacggagctgtgacat 539
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 681 gccaagggatgccatccacgttccacagagcacatgtttctgttgacagagctgtgacat 740
Query: 540 catattttagtctaagagctggaggatccctcacttatgactgctctgtgttgtcagcta 599
|||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 741 catattttagtctacgagctggaggatccctcactcatgactgctctgtgatgtcagcta 800
Query: 600 cttatggccaagcatggtctgaaaa 624
|||||||||||||||||||||||||
Sbjct: 801 cttatggccaagcatggtctgaaaa 825
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1026
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1016
Effective search space: 624840
Effective search space used: 624840
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
