Query= MSMg01no140_c02.b1 MSMg01no140_c02.b1 CHROMAT_FILE:
MSMg01no140_c02.b1 PHD_FILE: MSMg01no140_c02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:57:46 2005
(356 letters)
>mm_chr17_44530039_44530793
Length = 755
Score = 642 bits (332), Expect = 0.0
Identities = 350/356 (98%), Gaps = 1/356 (0%)
Strand = Plus / Minus
Query: 1 cctcttctccagaagccccctaacctacaggaccttctttaaattgagctccatagcaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 cctcttctccagaagccccctaacctacaggaccttctttaaattgagctccatagcaac 496
Query: 61 aaggcagttaccatctcgctatcttgagtagatcaataatgaactaggtctacaattaag 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 aatgcagttaccatctcgctatcttgagtagatcaataatgaactaggtctacaattaag 436
Query: 121 ggaaaccaatgtaatgtctagaagggtttgaagcctcagagaagacacagacctgccatc 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 ggaaaccaat-taatgtctagaagggtttgaagcctcagagaagacacagacctgccatc 377
Query: 181 tgaccacgtttaccttgacgcaagggaggaggggttatgtgaaaactgcatcacactgtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 tgaccacgtttaccttgacgcaagggaggaggggttatgtgaaaactgcatcacactgtc 317
Query: 241 ctcttggtcaggtaacctaagttccaaggtcacccaaccttgaggatgggcggggagttg 300
| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 316 cccttggtcaggtaacctaagttccaaggtcacccaaccttgaggatgggtggggagttg 257
Query: 301 gaaggaaaaggacgttctcatgactacagagttagagcccattgtaaagaatacag 356
|||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 256 gaaggaaaagaacgttctcatgactacagagctagagcccattgtaaagaatacag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 356
Length of database: 755
Length adjustment: 9
Effective length of query: 347
Effective length of database: 746
Effective search space: 258862
Effective search space used: 258862
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no140_c02.g1 MSMg01no140_c02.g1 CHROMAT_FILE:
MSMg01no140_c02.g1 PHD_FILE: MSMg01no140_c02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:57:46 2005
(151 letters)
>mm_chr17_44392299_44392849
Length = 551
Score = 238 bits (123), Expect = 1e-67
Identities = 141/147 (95%)
Strand = Plus / Plus
Query: 1 attcccccttctcatctctgttctgggtaccacttctctcttatgtcttctcccatgtct 60
|||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||
Sbjct: 201 attcccccttctcatctctgttctgggttccacttctctcttatttcttctcccatgtct 260
Query: 61 ttctgtcttggggaatttttctatttaaaatggattctccatttgttctacaaagtctct 120
||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 261 ttctgtcttggggaacttttctatttaaaatggattctccatttgttctagaaagtctct 320
Query: 121 ttgctcctcgaagtaaagtactattca 147
|||||||||||||||||| || |||||
Sbjct: 321 ttgctcctcgaagtaaagcaccattca 347
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 151
Length of database: 551
Length adjustment: 8
Effective length of query: 143
Effective length of database: 543
Effective search space: 77649
Effective search space used: 77649
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
