Query= MSMg01no141_b03.b1 MSMg01no141_b03.b1 CHROMAT_FILE:
MSMg01no141_b03.b1 PHD_FILE: MSMg01no141_b03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:59:03 2005
(723 letters)
>mm_chr17_37909721_37910843
Length = 1123
Score = 1046 bits (541), Expect = 0.0
Identities = 553/557 (99%)
Strand = Plus / Minus
Query: 1 gtgtccaaagcctgcagtgtggactgacctaatggtacacagaacagaggctaacaatta 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 gtgtccaaagcctggagtgtggactgacctaatggtacacagaacagaggctaacaatta 696
Query: 61 tctgccctgagaagtacttagctgttccagtccaatacaaagggtttacatgtcttgagg 120
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 tctgccctgagaactacttagctgttccagtccaatacaaagggtttacatgtcttgagg 636
Query: 121 aatatggaattttagtataacaagctgagatcacttagaagtagtttgaagatttacaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 aatatggaattttagtataacaagctgagatcacttagaagtagtttgaagatttacaaa 576
Query: 181 tgtacaaatgttcatctgcacatacataaatttgtaaattttagaaaatcttgcaaatat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 tgtacaaatgttcatctgcacatacataaatttgtaaattttagaaaatcttgcaaatat 516
Query: 241 acccataaatttttgtttaccgttgtttattctcctataatatcactattttttaattat 300
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 515 acccataaatttttgtttaccgttgtttcttctcctataatatcactattttttaattat 456
Query: 301 ttacatcttagaaaattctgacaattatttctcatatttttttctttaatggtttgttaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 ttacatcttagaaaattctgacaattatttctcatatttttttctttaatggtttgttaa 396
Query: 361 atggtagattaaaaagttgacagtttgcaaaattggaatgtttacatgttctgtaaacag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 atggtagattaaaaagttgacagtttgcaaaattggaatgtttacatgttctgtaaacag 336
Query: 421 gatccataaaagaattattaagttctacattacatgtgtgtataatttcatctgaagaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 gatccataaaagaattattaagttctacattacatgtgtgtataatttcatctgaagaat 276
Query: 481 ttaaagaattttatgagaggaaataccctgcttcataaagctattaaggcagtaagtacc 540
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 ttaaagacttttatgagaggaaataccctgcttcataaagctattaaggcagtaagtacc 216
Query: 541 acttatatttaatactt 557
|||||||||||||||||
Sbjct: 215 acttatatttaatactt 199
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 723
Length of database: 1123
Length adjustment: 10
Effective length of query: 713
Effective length of database: 1113
Effective search space: 793569
Effective search space used: 793569
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no141_b03.g1 MSMg01no141_b03.g1 CHROMAT_FILE:
MSMg01no141_b03.g1 PHD_FILE: MSMg01no141_b03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:59:04 2005
(696 letters)
>mm_chr17_37750320_37751415
Length = 1096
Score = 1168 bits (604), Expect = 0.0
Identities = 686/756 (90%), Gaps = 67/756 (8%)
Strand = Plus / Plus
Query: 1 agctaaagtaatggaggaaatctaaacaccccaaatatcttttgtatctgaagtttcatg 60
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 201 agctaaagtaatggaggaaatctaaacacagcaaatatcttttgtatctgaagtttcatg 260
Query: 61 ttaggaaatgatctgtacaaatgaatgttgagtgtggccaagtcccagacgatattattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttaggaaatgatctgtacaaatgaatgttgagtgtggccaagtcccagacgatattattt 320
Query: 121 aaaaattggtttgcaacacaacatgaggaaatctaaaacatcaacagatcctactaaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaaattggtttgcaacacaacatgaggaaatctaaaacatcaacagatcctactaaaaa 380
Query: 181 agctatagccaac----------------------------------------------- 193
|||||||||||||
Sbjct: 381 agctatagccaacaaacctggaaaacctggatgaaatagacaaatttctagacagatacc 440
Query: 194 ------------aaaatcaggatcagattaatgtcctaaacagtctcatatcctctaata 241
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aggtaccaaagtaaaatcaggatcagattaatgtcctaaacagtctcatatcctctaata 500
Query: 242 gtctctcaatcaaaaaaaaaaaaaaaaaaaaaaaaaaggccaagaccagatgggtttagt 301
||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 501 gtctctcaatcaaaaaaaaaaaaaaaaaaaa-------gccaagaccagatgggtttagt 553
Query: 302 gcagagttctatcagaccttcaaagaagacctaattccaattctcctcaaactattccac 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 gcagagttctatcagaccttcaaagaagacctaattccaattctcctcaaactattccac 613
Query: 362 aatatagaaacagaaggtattctactcaattcattctatgaagccacagttactctgatt 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 aatatagaaacagaaggtattctactcaattcattctatgaagccacagttactctgatt 673
Query: 422 cctaaaccacgtaaagacccaacaacgatagaaaacttcagactaatttcccttatgaat 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 cctaaaccacgtaaagacccaacaacgatagaaaacttcagactaatttcccttatgaat 733
Query: 482 atcgatgcaaaaatactcaataaaattctctcaaaccaaatccaaggacacatcaaaatg 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 atcgatgcaaaaatactcaataaaattctctcaaaccaaatccaaggacacatcaaaatg 793
Query: 542 atcatccatcatgatgaagtaggcttcatttcagggatgaagggatggtttaatatatgg 601
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 794 atcatccatcatgatgaagtaggcttcatttcagggatgaagggatgatttaatatatgg 853
Query: 602 aaatccatcaatgtaatccactatataaagaaactcaaagacaaaaaaaaccaaaaaaac 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 854 aaatccatcaatgtaatccactatataaagaaactcaaagacaaaaaaaaccaaaaaaac 913
Query: 662 aaa-aaaaaaaaccccacataatcatctctttagat 696
||| ||||||||||||||||||||||||||||||||
Sbjct: 914 aaacaaaaaaaaccccacataatcatctctttagat 949
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 696
Length of database: 1096
Length adjustment: 10
Effective length of query: 686
Effective length of database: 1086
Effective search space: 744996
Effective search space used: 744996
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
