Query= MSMg01no141_h23.b1 MSMg01no141_h23.b1 CHROMAT_FILE:
MSMg01no141_h23.b1 PHD_FILE: MSMg01no141_h23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:59:57 2005
(503 letters)
>mm_chr17_26424639_26425543
Length = 905
Score = 905 bits (468), Expect = 0.0
Identities = 495/510 (97%), Gaps = 12/510 (2%)
Strand = Plus / Plus
Query: 1 tccccagcactgcaaaaatgaatagacagtaagagaaagagataacataaagaactgaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tccccagcactgcaaaaatgaatagacagtaagagaaagagataacataaagaactgaga 260
Query: 61 ttaaaaaaaaa--tgtgtctggggaataaaaaaggctatcctttcattctctctattttt 118
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttaaaaaaaaaaatgtgtctggggaataaaaaaggctatcctttcattctctctattttt 320
Query: 119 ttttctctttcactccccctccactcatatcttttcttcctcttatgtgtggacagttgt 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttttctctttcactccccctccactcatatcttttcttcctcttatgtgtggacagttgt 380
Query: 179 cctgctgggatctatgttgtatgctcttctccccgaactgcagcttcagaaaagtccctg 238
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 381 cctgctgggatctatgttgtatgctcttctccccgaactgcagcttcagaaaggtccctg 440
Query: 239 ggacaagatactttgactagactctcttggcatgtcaaggacacattttt-----atcag 293
||||||||||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 441 ggacaagatactttgactagactctgttggcatgtcaaggacaca-----gacaaatcag 495
Query: 294 gtatacgtacacgttactcatactaagaggtgcaggtgtctaaccagacatagggcatgg 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 gtatacgtacacgttactcatactaagaggtgcaggtgtctaaccagacatagggcatgg 555
Query: 354 ccatgagccaagagaatgagggctgtattacaagtctgaggtttatggtacctggagggt 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 ccatgagccaagagaatgagggctgtattacaagtctgaggtttatggtacctggagggt 615
Query: 414 tagcattgtcttcacagcagcaaaaagcttgtctgtggaggtgtgaacctcaggcgtgga 473
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 616 tagcattgtcttcacagcagcaaaaagcttgtctgtggaggtgtgaacctcaggggtgga 675
Query: 474 taaatctggttgtaacttggtcatgcttac 503
||||||||||||||||||||||||||||||
Sbjct: 676 taaatctggttgtaacttggtcatgcttac 705
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 503
Length of database: 905
Length adjustment: 10
Effective length of query: 493
Effective length of database: 895
Effective search space: 441235
Effective search space used: 441235
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no141_h23.g1 MSMg01no141_h23.g1 CHROMAT_FILE:
MSMg01no141_h23.g1 PHD_FILE: MSMg01no141_h23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:59:58 2005
(615 letters)
>mm_chr17_26535835_26536849
Length = 1015
Score = 1052 bits (544), Expect = 0.0
Identities = 598/616 (97%), Gaps = 1/616 (0%)
Strand = Plus / Minus
Query: 1 gtaactcccgcgctaggggaagcaaagacaggagaattcctgttgctcagtggctgccat 60
|||||||| | |||||||||||||||||||||||||||||||||| |||||| ||||||
Sbjct: 674 gtaactccagtgctaggggaagcaaagacaggagaattcctgttgttcagtgactgccac 615
Query: 61 cttagtggaaccaatgatgttcagtaagagactgtgtctccaaataaaacagaacaaaaa 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 614 cttagtggaaccaatgatgttcagtaagagactgtgtctccaaaaaaaacagaacaaaaa 555
Query: 121 ccctgagagtcatagcggaagacacctgacccctggcttctacatgcaggcatgcactca 180
|||| ||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 554 ccctaagagtcatagcagaagacacctgacccatggcttccacatgcaggcatgcactca 495
Query: 181 aacatggacagttccacctgaacatgtacacacatgtgaatgtgcatggacacacactgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 aacatggacagttccacctgaacatgtacacacatgtgaatgtgcatggacacacactgt 435
Query: 241 gaatgtgaacggacacacgttgtaaatgtgcacatgcgccatatgttct-gggggaccca 299
||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 434 gaatgtgaacggacacacgttgtaaatgtgcacatgcgccatatggcctggggggaccca 375
Query: 300 tctgctctcagcagctgtgtgaccttggacaagatagatcacctgcctgagcctcattgc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 tctgctctcagcagctgtgtgaccttggacaagatagatcacctgcctgagcctcattgc 315
Query: 360 ctttatctacaaaatgggaccgctggagcctctgactgtacagtccatgggagaccaagt 419
|||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 314 ctttatctacaaaatgggaccgctagagcctctaactgtacagtccatgggagaccaagt 255
Query: 420 aaacactgggtgattagcccaaggcctggtcctcagtgcgtattcagtaactgacacctg 479
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 254 aaacactgggtgattagcccaaggcctggtcctcagtgggtattcagtaactgacacctg 195
Query: 480 tcactgtccctctgaaggagccactgagccacatgcccctggcacctgatctcccaggtc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 tcactgtccctctgaaggagccactgagccacatgcccctggcacctgatctcccaggtc 135
Query: 540 tcctcagccctctgattcagattagtgtggtcaccaaaaacctcacacagctagctccaa 599
|||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||
Sbjct: 134 tcctcagccctctgattcagatcagtgtggtcaccataaacctcacacagctagctccaa 75
Query: 600 aaggttttgagaatgg 615
||||||||||||||||
Sbjct: 74 aaggttttgagaatgg 59
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 615
Length of database: 1015
Length adjustment: 10
Effective length of query: 605
Effective length of database: 1005
Effective search space: 608025
Effective search space used: 608025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
