CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCGAGAATCCGCGGAA
TTCCAATATTTTTCCCGAGCTTTCCTTGATATTCGATTACACCATAGAAA
ATTCACTGTAACTATACTCCTGTGTGGATTTACAGGTGTGGCTCACAGAG
CTGGTCGCTGTACTGAGAGACTGGGACTGAGAATCCTGTCCTGTGCCCAC
TGTTACCCAAGAGTCACAGCCTCCTCCTCCTGACCAGGGCAGATGTGCTG
ACTCCTTTTCTCTTCTGATTCCAGATCTTCCACTAGCTAAAGGATACACT
TCAGCAAGACATAAGGAAGAGATTTTATTTCCCCTACTGCTACTCTGGGG
AGACAAAGTTCTTCAGCCACTGGAGGTGGAAGCTGAGGGTTGACATATTG
TCAGATCCACTGTCCCCACCCATGGGAGCTAACCACTTCCCTTGCTTACT
AACTGACCAGGAACTGCAGGGCCTGGGCTCCTGTTTACTCTGTACTCTTT
GCTCTCCTTAATTCTTTTGGACCAGGTTTTCTCTCACTCCCAGTTCATAC
TCAGAATGTCCTCTGGGCTTCTTCAAGTTAGACTTGACACATCATCCACC
ANATTCCTTATGCCAAAGTATTTCTGAAAGGCAAGTCTACCCAGGTCTTT
CCCACCTGCAACTTCCTGGTGTGCCACACTAC

CATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACTGAATGGCAGAGA
AGCACCTGAAAAAATGTTCAAGATCCTTAATCATCAGGGAAATGCAAATC
AAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAA
AAATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAACAC
TCCTACCATTGTTAGTGGGATTGCAAGCTTATACAACCACTCTGGAAATC
AGTCTGGCGGTTCCTTAGAAAATTGGACATAGTACTACCGGAGGATCCAG
CAATACCTCTCCTGGGCATATATCCAGAAGATGTCCCAACCGGTAAGAAG
GGCACATGCTCCACTACCCCCATAGCAGCCTTATTTATAGTAGCCAGAAG
CTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGT
GGTACATTTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTT
ATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAATGA
GGTAACACAATCACAAAGGAACTCACACAATATGTACTCACTGATAAGTG
GATATTAGCCCAAAACTTAGAATACCCAAGATATAC

Query= MSMg01no143_c16.b1 MSMg01no143_c16.b1 CHROMAT_FILE:
MSMg01no143_c16.b1 PHD_FILE: MSMg01no143_c16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:03:39 2005
         (639 letters)



>mm_chr17_10942525_10943564
          Length = 1040

 Score = 1152 bits (596), Expect = 0.0
 Identities = 625/635 (98%), Gaps = 1/635 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcc-aatatttttcccgagctttccttgatattcgattacaccatagaaaattcac 63
           ||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccaaatatttttacagagctttccttgatattcgattacaccatagaaaattcac 264

                                                                       
Query: 64  tgtaactatactcctgtgtggatttacaggtgtggctcacagagctggtcgctgtactga 123
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 265 tgtaactatactcctgtgtggatttacaggtgtggcttacagagctggtcgctgtactga 324

                                                                       
Query: 124 gagactgggactgagaatcctgtcctgtgcccactgttacccaagagtcacagcctcctc 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gagactgggactgagaatcctgtcctgtgcccactgttacccaagagtcacagcctcctc 384

                                                                       
Query: 184 ctcctgaccagggcagatgtgctgactccttttctcttctgattccagatcttccactag 243
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 385 ctcctgaccagggcagatgtgctgactccttttctcttctaattccagatcttccactag 444

                                                                       
Query: 244 ctaaaggatacacttcagcaagacataaggaagagattttatttcccctactgctactct 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctaaaggatacacttcagcaagacataaggaagagattttatttcccctactgctactct 504

                                                                       
Query: 304 ggggagacaaagttcttcagccactggaggtggaagctgagggttgacatattgtcagat 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ggggagacaaagttcttcagccactggaggtggaagctgagggttgacatattgtcagat 564

                                                                       
Query: 364 ccactgtccccacccatgggagctaaccacttcccttgcttactaactgaccaggaactg 423
           |||||||| |||| |||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 565 ccactgtctccactcatgggagctaaccacttcccttgcttactaactgaccagaaactg 624

                                                                       
Query: 424 cagggcctgggctcctgtttactctgtactctttgctctccttaattcttttggaccagg 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 cagggcctgggctcctgtttactctgtactctttgctctccttaattcttttggaccagg 684

                                                                       
Query: 484 ttttctctcactcccagttcatactcagaatgtcctctgggcttcttcaagttagacttg 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ttttctctcactcccagttcatactcagaatgtcctctgggcttcttcaagttagacttg 744

                                                                       
Query: 544 acacatcatccaccanattccttatgccaaagtatttctgaaaggcaagtctacccaggt 603
           ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 acacaccatccaccaaattccttatgccaaagtatttctgaaaggcaagtctacccaggt 804

                                              
Query: 604 ctttcccacctgcaacttcctggtgtgccacacta 638
           |||||||||||||||||||||||||||||||||||
Sbjct: 805 ctttcccacctgcaacttcctggtgtgccacacta 839


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1040
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1030
Effective search space:   647870
Effective search space used:   647870
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)