Query= MSMg01no147_f10.b1 MSMg01no147_f10.b1 CHROMAT_FILE:
MSMg01no147_f10.b1 PHD_FILE: MSMg01no147_f10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:09:54 2005
(408 letters)
>mm_chr17_12417964_12418771
Length = 808
Score = 690 bits (357), Expect = 0.0
Identities = 393/407 (96%), Gaps = 4/407 (0%)
Strand = Plus / Minus
Query: 6 gaattcacattcagccactcattgcactcgaactcggatacagtggt----tttgtttgt 61
||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||
Sbjct: 684 gaattcacattcagccattcattgcactcgaacgcggatacagtggttttgtttgtttgt 625
Query: 62 ttgtttgtttgtttcgatcttgtatcctgtggccttgctgagttctttgaaaagttatag 121
||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 624 ttgtttgtttgtttcaatcttgtatcctgtggccttgctgagctctttgaaaagttatag 565
Query: 122 ttgctgcttttgtaggctccatccatttatcgagacatgtgacccaggaacaagggcagt 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ttgctgcttttgtaggctccatccatttatcgagacatgtgacccaggaacaagggcagt 505
Query: 182 gtccctccttccagggtaaaatctaattggcagtcgtgtgagtcccctttctttgtcacc 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 504 gtccctccttccagggtaaaatctaattggcagtcgtgtgagtcccctttctttgacacc 445
Query: 242 agtgttcatttatgacagttgggggactgttccctctggatgtgcagagggttttgctct 301
|||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||
Sbjct: 444 agtgttcatttatgacagttgggggactgttccctctggatgtgcaaagggctttgctct 385
Query: 302 gtggctctcatttctggggttttggctccctctcagggcagggtatccttcctacagtga 361
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 384 gtggctctcatttctggggttttggctccctctcagggcagggtagccttcctacagtga 325
Query: 362 actgatatctcccccgcctctgcctctgtttcctcagagatggccca 408
|||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 324 actgatatctcctctgcctctgcctctgtttcctcagagatggccca 278
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 408
Length of database: 808
Length adjustment: 9
Effective length of query: 399
Effective length of database: 799
Effective search space: 318801
Effective search space used: 318801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no147_f10.g1 MSMg01no147_f10.g1 CHROMAT_FILE:
MSMg01no147_f10.g1 PHD_FILE: MSMg01no147_f10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:09:54 2005
(365 letters)
>mm_chr17_12275121_12275889
Length = 769
Score = 615 bits (318), Expect = e-180
Identities = 354/368 (96%), Gaps = 4/368 (1%)
Strand = Plus / Plus
Query: 1 accaggctcaaagaaacacactagaggaaacagggagttggctgagcaaggatgaaatct 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 201 accaggctcaaagaaacacactagagaaaacagggagttggctgagcaaggatgaaatct 260
Query: 61 ggggttcacaactcagggctgtcaggctattttccccaaatgtaataaacttggatccat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggggttcacaactcagggctgtcaggctattttccccaaatgtaataaacttggatccat 320
Query: 121 tcctatgaggtacgcgctagaagggtgggaaaagaaaacactactcagagggacaacggg 180
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcctatgaggtatgcgctagaagggtgggaaaagaaaacactactcagagggacaacggg 380
Query: 181 aattcttcctctggaagaactcacactgtgatccattggagtcgaagctttgggcgtggg 240
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct: 381 aattcttcctctggaagaactcacactgtgacccattggagtcgaagctttgggcgtgtg 440
Query: 241 actggtggcatggtccctgtgtcccacagaaggaacatgaggaatggggg----ctggtg 296
|||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct: 441 actggtggcatggtccctgtgtcccacagaaggaacatgaggaatgggggggggctgttg 500
Query: 297 tagcaagtctgcccccgaccccaacagtgaatgttggtcctgccgccgccccatgtcctg 356
||||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||
Sbjct: 501 tagcaagtctgcccccgaccccaacagtgaatgggggtcctgccgctgcctcatgtcctg 560
Query: 357 ttctcaaa 364
|||||||
Sbjct: 561 gtctcaaa 568
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 365
Length of database: 769
Length adjustment: 9
Effective length of query: 356
Effective length of database: 760
Effective search space: 270560
Effective search space used: 270560
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
