CTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCGAGAGATCCGCGGAA
TTCTTTGCACTCTAAAATGTACATATGTACATGGACTTATTTCTTGGTCT
TTACTTCTATTCCATTGAATGACCCATCTATATATCTACCAATAAAATGT
TTTGTTTTGTTTTGTTTTGTTTTGTTTTTTATTTTTCACAATTGCTTTGT
AGTACAGCTTAAGTTCAGGGCTGGTAATTCCTCCAGTAGTTCTTTCATGA
TAAGAATTGTGTTTTCTATGCTGGGTTTTTGTTTTTCTATATGAAATTGA
GAATTGCTCTTTCAATGTTTGTGAAGAACTGTGTTGAAATCTTGATGGGG
ATTACATTGAATCTCTTGATCACTTTTGTTTGGATGGCCATATTTAACTA
TGTTGATCCTAAAAATCTGAGTATTGGAGTTCTCTCCATTCTCTTAGATC
TTCTTCAATTGCTTTTTTGAAGGACTTGAAGTTATTTTCATATCGATCTT
TCATTTACTTGTTAAGTATTACACCAAGATACTTAATACCACTTCTGCAT
TTTTTGAAGGGTGCTGTTTTTCTATTTTTTCTCATTCTTGTTATCCTTTG
AGTAGAGGAAGGCTACTAATTTGTTTGATCAAAATTAATATCCAGCTACT
TTGCTTAAGTTGTGTATTAGCTGTAGAAGAACTCTGG

CCNNNNNCCGATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCAGGCCCTCTGCATCATG
TCTGATTGAATGAAGCCATGTTCCTACCTAGATGATAATTGACTGGAGTT
TTGAACTGCTAAGGAAGCACAAATTAAATGTTGTGCTTTTATGTGTTGAC
TTTTTAATGGTGTTTGTTCACAGCATTTAAAACATATGACAGTGTATAAC
ACAATATTTCTATATTTTTAAAAATGTAATTGATAATCAAAGTATCTATT
TAATTTCATCAATAACATTGAATTGTGTATTTTAAAAAATAATATATAGT
ATTATCTTAGTGTTAAAGTTTCTATCAACAATATTTTTAAACATCCAGTG
TTTAGCATTTCTTTGAGCTGTATATTTTTGAGCAATATCATTAATTAACA
GAAAAGAGCCAGATTTGTTCTTAGTGTCTGAATGGCTCTATTTATTTATT
TATTTATTTTTAGTTTTTTGAAACAGGGTTTCTATGTATAGCCCTGGCTG
TCCTGGAACTCACTCAGTAGACCAGTCTGGCCTCGAACTCAGAAAGCTGC
CTGCCTCTGCCTCCCAAGTACTGGGATTAAAGGTGTGTGCCACCATACCC
GGTTCTGAATGGCTCTTTTTATGCATACAGAGGATACTTTAAAATT

Query= MSMg01no148_m06.g1 MSMg01no148_m06.g1 CHROMAT_FILE:
MSMg01no148_m06.g1 PHD_FILE: MSMg01no148_m06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:11:46 2005
         (615 letters)



>mm_chr17_18970403_18971417
          Length = 1015

 Score =  998 bits (516), Expect = 0.0
 Identities = 596/634 (94%), Gaps = 19/634 (2%)
 Strand = Plus / Minus

                                                                       
Query: 1   tcaggccctctgcatcatgtctgattgaatgaagccatgttcctacctagatgataattg 60
           ||||||||||||||||||| | |||| ||||||||||||||||||||| |||||||||||
Sbjct: 874 tcaggccctctgcatcatgccagatttaatgaagccatgttcctaccttgatgataattg 815

                                                                       
Query: 61  actggagttttgaactgctaaggaagcacaaattaaatgttgtgcttttatgtgttgact 120
           ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||
Sbjct: 814 actggagttttgaactgctaagccagcacaaattaaatgttgtgcttttatgtgttgact 755

                                                                       
Query: 121 ttttaatggtgtttgttcacagcatttaaaacatatgacagtgtataacacaatatttct 180
           |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||
Sbjct: 754 ttttaatggtgtttgttcacagcattaaaaacatatgacagtgtattacacaatatttct 695

                                                                       
Query: 181 atatttttaaaaatgtaattgataatcaaagtatctatttaatttcatcaataacattga 240
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 atatttctaaaaatgtaattgataatcaaagtatctatttaatttcatcaataacattga 635

                                                                       
Query: 241 attgtgtattttaaaaaataatatatagtattatcttagtgttaaagtttctatcaacaa 300
           ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||
Sbjct: 634 attgtgtattttaaaaaataaaatatagtattatcttagtgttcaagtttctatcaacaa 575

                                                                       
Query: 301 tatttttaaacatccagtgtttagcatttctttgagctgtatatttttgagcaatatcat 360
           ||||||||||||| || |||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 574 tatttttaaacatacaatgtttagcatttctttgagctgcatatttttgagcaatatcat 515

                                                                       
Query: 361 taattaacagaaaagagccagatttgttcttagtgtctgaatggctctatttatttattt 420
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 taattaacagaaaatagccagatttgttcttagtgtctgaatggctctatttatttattt 455

                                                                       
Query: 421 a----tttattttta---------------gttttttgaaacagggtttctatgtatagc 461
           |    ||||||||||               ||||||||||||||||||||||||||||||
Sbjct: 454 acttatttatttttattttttatttttttagttttttgaaacagggtttctatgtatagc 395

                                                                       
Query: 462 cctggctgtcctggaactcactcagtagaccagtctggcctcgaactcagaaagctgcct 521
           |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 cctgtctttcctggaactcactcagtagaccagtctggcctcgaactcagaaagctgcct 335

                                                                       
Query: 522 gcctctgcctcccaagtactgggattaaaggtgtgtgccaccatacccggttctgaatgg 581
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 gcctctggctcccaagtactgggattaaaggtgtgtgccaccatacccggttctgaatgg 275

                                             
Query: 582 ctctttttatgcatacagaggatactttaaaatt 615
           ||||||||||||||||||||||||| ||||||||
Sbjct: 274 ctctttttatgcatacagaggatacattaaaatt 241


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 615
Length of database: 1015
Length adjustment: 10
Effective length of query: 605
Effective length of database: 1005
Effective search space:   608025
Effective search space used:   608025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)