Query= MSMg01no149_i04.b1 MSMg01no149_i04.b1 CHROMAT_FILE:
MSMg01no149_i04.b1 PHD_FILE: MSMg01no149_i04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:12:48 2005
(419 letters)
>mm_chr17_67992090_67992908
Length = 819
Score = 775 bits (401), Expect = 0.0
Identities = 418/431 (96%), Gaps = 12/431 (2%)
Strand = Plus / Plus
Query: 1 caatcctgaacacagagcagggcttggcaggcctcatgcagcaggatggggcatagaggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caatcctgaacacagagcagggcttggcaggcctcatgcagcaggatggggcatagaggg 260
Query: 61 gctgacaaagcacagctgagaccatgaattgagcctgggcttctttcatttaactgggta 120
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctgacaaagcacagctaagaccatgaattgagcctgggcttctttcatttaactgggta 320
Query: 121 tgttcttcaatcgaaaatgcatgatctgattatttttatttagatgggaaggcagccttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgttcttcaatcgaaaatgcatgatctgattatttttatttagatgggaaggcagccttg 380
Query: 181 cttcttaaataggttattgtcacagtattttaaaatgaagcattagccagtaatttactg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttcttaaataggttattgtcacagtattttaaaatgaagcattagccagtaatttactg 440
Query: 241 tgagtgaatccttagggatagttgggaattaagagacccctccagagcaaagctcctaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgagtgaatccttagggatagttgggaattaagagacccctccagagcaaagctcctaaa 500
Query: 301 tactttgtgccaggataataagggtcttttaagaaatgttaacagttcagcaccccataa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tactttgtgccaggataataagggtcttttaagaaatgttaacagttcagcaccccataa 560
Query: 361 ctttctagtgcaggtaaataagtgtgtgtgtgtgtgtgtg------------gtgtgtat 408
|||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 561 ctttctagtgcaggtaaataagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggtgtgtat 620
Query: 409 atttgtgtgtg 419
|||||||||||
Sbjct: 621 atttgtgtgtg 631
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 419
Length of database: 819
Length adjustment: 9
Effective length of query: 410
Effective length of database: 810
Effective search space: 332100
Effective search space used: 332100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no149_i04.g1 MSMg01no149_i04.g1 CHROMAT_FILE:
MSMg01no149_i04.g1 PHD_FILE: MSMg01no149_i04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:12:48 2005
(335 letters)
>mm_chr17_68087580_68088314
Length = 735
Score = 594 bits (307), Expect = e-174
Identities = 328/335 (97%)
Strand = Plus / Minus
Query: 1 attccagcaactggggtgaggggtcgtcagcgctgggtctgccattgatgagtgatgtgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 attccagcaactggggtgaggggtcgtcagcgctgggtctgccattgatgagtgatgtgt 476
Query: 61 gaatctggatacaggcaaacatacatgtcagttgtatggacacgttaacatgtacacatg 120
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 475 gaatctggatacaggcaaacatacatgtcagttgtatggacaagttaacatgtacacatg 416
Query: 121 tacaataaagccctgtgacagaatcattacaaagatcaatctaaaagcaaccaaacaaaa 180
|||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 415 tacaataaagtcctgtgacagaatcattacaaagatcaatctaaaagcaagcaaacaaaa 356
Query: 181 acctcatctaacacatgttaggtactcataaacagtagccctagctttgccacggtttgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 355 acctcatctaacacatgttaggtactcataaacagtagccctagctttgcctcggtttgg 296
Query: 241 gggttacccatccttctacatcagagatttctggaactcttctagtagcatgactctcct 300
|||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct: 295 gggttacccatccttctacatcagagatttctggaactcttccagtagcatgagtctcct 236
Query: 301 cgtgttgtgggggtctattatgcgatagcttctaa 335
||||||||||||||||| |||||||||||||||||
Sbjct: 235 cgtgttgtgggggtctagtatgcgatagcttctaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 335
Length of database: 735
Length adjustment: 9
Effective length of query: 326
Effective length of database: 726
Effective search space: 236676
Effective search space used: 236676
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
