Query= MSMg01no151_c06.b1 MSMg01no151_c06.b1 CHROMAT_FILE:
MSMg01no151_c06.b1 PHD_FILE: MSMg01no151_c06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:14:52 2005
(527 letters)
>mm_chr17_84720303_84721231
Length = 929
Score = 934 bits (483), Expect = 0.0
Identities = 517/529 (97%), Gaps = 2/529 (0%)
Strand = Plus / Plus
Query: 1 tcttagttagaattatataattacaattagtattaaattagattttacatttttatcatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcttagttagaattatataattacaattagtattaaattagattttacatttttatcatt 260
Query: 61 tttgtccacattcaactgaagctatacctcaaattctggttttgtaggaaataatgactc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttgtccacattcaactgaagctatacctcaaattctggttttgtaggaaataatgactc 320
Query: 121 ttataggggggaaaaa--tgaatgaacagtccagcaagaaacaagccaacacccacaagg 178
|||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttatagggggaaaaaaaatgaatgaacagtccagcaagaaacaagccaacacccacaagg 380
Query: 179 tcagctcaagggactctcttagtgttttgaaaatatttcctgcctactatttgtaaatta 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcagctcaagggactctcttagtgttttgaaaatatttcctgcctactatttgtaaatta 440
Query: 239 ttttgtctgtgttatacatctttcagtaacaactcagctctttcttggctatttggctat 298
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttttgtctgtgtgacacatctttcagtaacaactcagctctttcttggctatttggctat 500
Query: 299 ctgtccacggtttgcaccagagcagatggcctatcccagcacaccccccccgatcatgat 358
||||||||||||||||||||||||||||||||||||||||||| | | |||||||||
Sbjct: 501 ctgtccacggtttgcaccagagcagatggcctatcccagcacagctgcggtgatcatgat 560
Query: 359 tgcgtaggcttgcttccctgccttctagacacaacacctcttcccgatgttgtgaatgct 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgcgtaggcttgcttccctgccttctagacacaacacctcttcccgatgttgtgaatgct 620
Query: 419 gtggggatgaacatgggatactccccacccctggggtaccaaactatggttttgtgatat 478
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 621 gtggggatgaacatgggatactccccacccctggggcaccaaactatggttttgtgatat 680
Query: 479 ttagactgaactgaattcagccagtgaaagacagaaacgggactcagta 527
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttagactgaactgaattcagccagtgaaagacagaaacgggactcagta 729
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 527
Length of database: 929
Length adjustment: 10
Effective length of query: 517
Effective length of database: 919
Effective search space: 475123
Effective search space used: 475123
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no151_c06.g1 MSMg01no151_c06.g1 CHROMAT_FILE:
MSMg01no151_c06.g1 PHD_FILE: MSMg01no151_c06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:14:52 2005
(347 letters)
>mm_chr17_84879202_84879949
Length = 748
Score = 625 bits (323), Expect = 0.0
Identities = 341/347 (98%), Gaps = 1/347 (0%)
Strand = Plus / Minus
Query: 1 cagggctttgtgggctttgtagatctgtgatgaggaaagctaagtgcttggctgaactcc 60
|||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||
Sbjct: 547 cagggctttgtgggctttgttgatctgtgatgaggaaggctaagtgcttggctgaactcc 488
Query: 61 ctttcagctcaggcaggctctgtgtgagtaggagcacgtggcctcggcccctcttgtctc 120
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 487 ctttcagctcaggcaggctctgtgtgagtaggagcacgtggcctcagcccctcttgtctc 428
Query: 121 tctgaggcacccaggagtctctaacaaggtcccgataatatacccttcagccagcctaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 tctgaggcacccaggagtctctaacaaggtcccgataatatacccttcagccagcctaag 368
Query: 181 gcagacccgggg-cccggcactggtacctcttctgtgaggcccttccaagtttgtggcta 239
|||||||||||| |||||||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 367 gcagacccggggccccggcactggttcctcctctgtgaggcccttccaagtttgtggcta 308
Query: 240 ctctcagaacaccacaaaagtcccctccatgctgggtcacacagcacattttatttcttc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 ctctcagaacaccacaaaagtcccctccatgctgggtcacacagcacattttatttcttc 248
Query: 300 caggaatcctcatgttggtccgtttttgcttgtgcagctgtgacatg 346
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 caggaatcctcatgttggtccgtttttgcttgtgcagctgtgacatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 347
Length of database: 748
Length adjustment: 9
Effective length of query: 338
Effective length of database: 739
Effective search space: 249782
Effective search space used: 249782
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
