Query= MSMg01no153_o02.b1 MSMg01no153_o02.b1 CHROMAT_FILE:
MSMg01no153_o02.b1 PHD_FILE: MSMg01no153_o02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:18:21 2005
(663 letters)
>mm_chr17_41894658_41895720
Length = 1063
Score = 1230 bits (636), Expect = 0.0
Identities = 654/660 (99%), Gaps = 2/660 (0%)
Strand = Plus / Plus
Query: 5 gaattcatcatgatctcagtagacaaggcatctgttactaaaaggtaggacttttaaaag 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatcatgatctaagtagacaaggcatctgttactaaaaggtaggacttttaaaag 264
Query: 65 tagacaaagacgaacagttttagagttttcaaaaattcctgcactcttgagcagtaaatc 124
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tagacaaagacgaagagttttagagttttcaaaaattcctgcactcttgagcagtaaatc 324
Query: 125 aatttgccctcagggcctattttctttttgtcctagaagaaactagttgtcaaataaatc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aatttgccctcagggcctattttctttttgtcctagaagaaactagttgtcaaataaatc 384
Query: 185 tatgaagctaattattcagtcacttggttggtttatcttttgaacatttttctgttactt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tatgaagctaattattcagtcacttggttggtttatcttttgaacatttttctgttactt 444
Query: 245 tggaaaaaagtgaagccaagtgcaaatgctatagaatgagaggctaattagtctgtgtga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tggaaaaaagtgaagccaagtgcaaatgctatagaatgagaggctaattagtctgtgtga 504
Query: 305 gtccggggaggggattgggaacaggcaggaagaactgatccttgtcaaactaggggacat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gtccggggaggggattgggaacaggcaggaagaactgatccttgtcaaactaggggacat 564
Query: 365 taactaagtgtccaaatctaaatagggtgattatcatccatatcttgacttagccatcct 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 taactaagtgtccaaatctaaatagggtgattatcatccatatcttgacttagccatcct 624
Query: 425 ttgtgtaaataaaataaaataaaataaaataaaataaaataaaataaa-ataaatagtga 483
|||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct: 625 ttgtgtaaataaaataaaataaaataaaataaaataaaataaaataaagataa-tagtga 683
Query: 484 aatgtataaaataaattgcaggttgaagaaagagaacgatgcattaagatgtaacagaag 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 aatgtataaaataaattgcaggttgaagaaagagaacgatgcattaagatgtaacagaag 743
Query: 544 ttttaaaatgaaagtaaagcataaaaacaaaatttccttcttatatgcctgaagtcataa 603
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 744 ttttaaaatgaaagtaaagcataaaaacaaaatttctttcttatatgcctgaagtcataa 803
Query: 604 aaagggaggagagaaattaactttttaaagatggaaaagatgaaaaaaaccacaagacat 663
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 804 aaagggaggagagaaattaactttttaaagatggaaaagatgaagaaaaccacaagacat 863
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 54
Number of extensions: 7
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 663
Length of database: 1063
Length adjustment: 10
Effective length of query: 653
Effective length of database: 1053
Effective search space: 687609
Effective search space used: 687609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no153_o02.g1 MSMg01no153_o02.g1 CHROMAT_FILE:
MSMg01no153_o02.g1 PHD_FILE: MSMg01no153_o02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:18:22 2005
(630 letters)
>mm_chr17_42007808_42008837
Length = 1030
Score = 1156 bits (598), Expect = 0.0
Identities = 622/630 (98%)
Strand = Plus / Minus
Query: 1 ttaagttttaggttttaaagtatgtttttgttcaatttgtataaatgcttatgaccttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 830 ttaagttttaggttttaaagtatgtttttgttcaatttgtataaatgcttatgaccttca 771
Query: 61 aacacatgccaaaccactaataattcatgtaataattcaatggtgaaatcccttctttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 aacacatgccaaaccactaataattcatgtaataattcaatggtgaaatcccttctttct 711
Query: 121 gtaatgttagagctgtaagcttttctttgttgtgcattaatggtagaaaattaacatcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 gtaatgttagagctgtaagcttttctttgttgtgcattaatggtagaaaattaacatcct 651
Query: 181 cgagatgagtgaaaaataatatcatgaagagagtcaggctgaaggagttcacagttttcc 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 cgagatgagtgaaaaataatatcatgaagagagtcaggctgaaggagttcacagttttct 591
Query: 241 gctcaataatgttaaaagggttgtatagagggcgaattaaaagtaaaaatactttctttt 300
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 590 gctcaataatgttaaaagggttgtatagagggtgaattaaaagtaaaaatactttctttt 531
Query: 301 tccttacaaaagatctttaattatacttcaagcaaaattcaagtgaaatatggaaattag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 tccttacaaaagatctttaattatacttcaagcaaaattcaagtgaaatatggaaattag 471
Query: 361 catgtaatttttccaaatgcataattttaaaatcctctttctgtttaataatctaaattc 420
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 470 catgtaatttttccaaatgcataattttaaaatcctctttctgtttaatgatctaaattc 411
Query: 421 tctttcttgaagagctttaaaaaggcaaagcccagaaaagaaaatgatttagcttagttg 480
||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct: 410 tctttcttgaagagctttaaaggggcaaagcccagaagagaaaatgatttagcttagttg 351
Query: 481 cataaaacatttccatatctctgatcatttatctaatgtccttgagcagcatgaagataa 540
|||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 350 cataaaacgtttccatatctctgaacatttatctaatgtccttgagcagcatgaagataa 291
Query: 541 tcaaatccttcttactataaacatggagttatttcgttgctacccaggtactacccttgc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 tcaaatccttcttactataaacatggagttatttcgttgctacccaggtactacccttgc 231
Query: 601 tgttttaaaagacaagagggaatcttcaca 630
||||||||||||||||||||||||||||||
Sbjct: 230 tgttttaaaagacaagagggaatcttcaca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 630
Length of database: 1030
Length adjustment: 10
Effective length of query: 620
Effective length of database: 1020
Effective search space: 632400
Effective search space used: 632400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
