Query= MSMg01no155_g16.b1 MSMg01no155_g16.b1 CHROMAT_FILE:
MSMg01no155_g16.b1 PHD_FILE: MSMg01no155_g16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:19 2005
(620 letters)
>mm_chr17_4501602_4502621
Length = 1020
Score = 1183 bits (612), Expect = 0.0
Identities = 618/620 (99%)
Strand = Plus / Minus
Query: 1 aactgaaccacaagctccttgaccttgctatttcttactttctactctctggtaaaatgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 820 aactgaaccacaagctccttgaccttgctatttcttactttctactctctggtaaaatgg 761
Query: 61 gatgtcatcacctgctacctaggggctgttgctgagtctgcaaaacaccagatttaattc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760 gatgtcatcacctgctacctaggggctgttgctgagtctgcaaaacaccagatttaattc 701
Query: 121 ctagaagtggaataacatgggttataataactgtgaatattattttgaaatacatgttca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 ctagaagtggaataacatgggttataataactgtgaatattattttgaaatacatgttca 641
Query: 181 agaagatgacagacatgagaaatataaaacagaggtacaaacaataattgcatgtctggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 agaagatgacagacatgagaaatataaaacagaggtacaaacaataattgcatgtctggt 581
Query: 241 tcagcgtggtgggaacaatgagtggcatgttcagatgtgacgttctgaatttgacaaggt 300
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 580 tcagcgtggtgggaacaatgagtggcatgttcagatgtgatgttctgaatttgacaaggt 521
Query: 301 ttcaattagtgatttttctgagtctccagcaaagtttagatatctgtcaggagcaagcct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 ttcaattagtgatttttctgagtctccagcaaagtttagatatctgtcaggagcaagcct 461
Query: 361 gacagggttccagcgtcaaatcactataggggccactggctagaagattcaacagattct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 gacagggttccagcgtcaaatcactataggggccactggctagaagattcaacagattct 401
Query: 421 gtcacttggtgaagtctcaagaccttttagtgacacctctgaactgtccccagggatggc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 gtcacttggtgaagtctcaagaccttttagtgacacctctgaactgtccccagggatggc 341
Query: 481 tcagcatgcaccctgtgctgaacacacttgctctccagggtcctgcattgccctcctcta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 tcagcatgcaccctgtgctgaacacacttgctctccagggtcctgcattgccctcctcta 281
Query: 541 tctgaggctagggctcactcaaggacagggagtgaggtcttgttttgtagggtgagcagc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 tctgaggctagggctcactcaaggacagggagtgaggtcttgttttgtagggtgagcagc 221
Query: 601 taggcttaagcgcatacagc 620
|||||||||| |||||||||
Sbjct: 220 taggcttaagtgcatacagc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 620
Length of database: 1020
Length adjustment: 10
Effective length of query: 610
Effective length of database: 1010
Effective search space: 616100
Effective search space used: 616100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no155_g16.g1 MSMg01no155_g16.g1 CHROMAT_FILE:
MSMg01no155_g16.g1 PHD_FILE: MSMg01no155_g16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:19 2005
(657 letters)
>mm_chr17_4458601_4459657
Length = 1057
Score = 1255 bits (649), Expect = 0.0
Identities = 655/657 (99%)
Strand = Plus / Plus
Query: 1 agagaggagacaataaccgccgtggtcagtacccatcagtcaggaggccaagtaagtctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agagaggagacaataaccgccgtggtcagtacccatcagtcaggaggccaagtaagtctt 260
Query: 61 aatggctcaaacacatttacatgatgcatcttaatgatcttgtggtatataaaaataatt 120
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 261 aatggctcaaacacatttacatgatgcatcttaatgatcttgtggtatgcaaaaataatt 320
Query: 121 taataataaggtatagaaatatcctttctattttaaatacacacacatgcatgcattcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taataataaggtatagaaatatcctttctattttaaatacacacacatgcatgcattcac 380
Query: 181 acacacacacacacacatgcacacccacaggcataatacatcgacttccaaactcagtat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acacacacacacacacatgcacacccacaggcataatacatcgacttccaaactcagtat 440
Query: 241 gaacactcttaggctgtaattaaataaaaagtaacatccgcatggctgatgtcgacatta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaacactcttaggctgtaattaaataaaaagtaacatccgcatggctgatgtcgacatta 500
Query: 301 agagccctctgtcaatcctgatcagatcatatagaaaacagccggaagggtacctggaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agagccctctgtcaatcctgatcagatcatatagaaaacagccggaagggtacctggaag 560
Query: 361 caaagacagacctaaaccatgtaactcttttaggaactgggatgatgtccacaaaaacac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 caaagacagacctaaaccatgtaactcttttaggaactgggatgatgtccacaaaaacac 620
Query: 421 acaagaaacaggtaccattttctttcacacagcctcaaagtatataagtctggacctctc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 acaagaaacaggtaccattttctttcacacagcctcaaagtatataagtctggacctctc 680
Query: 481 cctttggtcaccacccaccgtctcagacaaacttgctaccttagggagtcttttctattg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cctttggtcaccacccaccgtctcagacaaacttgctaccttagggagtcttttctattg 740
Query: 541 taatcttattctggccattcagtacaattctgggaactaaaatatttttgtcctggagaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 taatcttattctggccattcagtacaattctgggaactaaaatatttttgtcctggagaa 800
Query: 601 gatagtgtgaggtttttgaatggcatcaatgtcttattctgctaacaaaattaaacg 657
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gatagtgtgaggtttttgaatggcatcaatgtcttattctgctaacaaaattaaacg 857
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1057
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1047
Effective search space: 677409
Effective search space used: 677409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
