Query= MSMg01no157_j20.b1 MSMg01no157_j20.b1 CHROMAT_FILE:
MSMg01no157_j20.b1 PHD_FILE: MSMg01no157_j20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:22:59 2005
(321 letters)
>mm_chr17_64361411_64362126
Length = 716
Score = 574 bits (297), Expect = e-168
Identities = 309/315 (98%), Gaps = 5/315 (1%)
Strand = Plus / Plus
Query: 4 ggaattcttacatgtgttttacaaagatgagttaaaaataaaatttcttttcatagaaat 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcttacatgtgttttacaaagatgagttaaaaataaaatttcttttcatagaaat 263
Query: 64 ttacttgttatttactttccaatacaaatgtccccaaaattggcctcagtaaagtgattt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ttacttgttatttactttccaatacaaatgtccccaaaattggcctcagtaaagtgattt 323
Query: 124 tgacacttatatggaaatgtacttctgcctaatgtgtttctgactaagattattaaggca 183
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 324 tgacacttatatggaaatgtacttctgcctaat-tgtttctgactaagattattaaggca 382
Query: 184 atatatttattgattctgaagttgaattgcagaggaagtgctttggcaaagctgtcttgg 243
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 atatatt----gattctgaagttgaattgcagaggaagtgctttggcaaagctgtcttgg 438
Query: 244 ttctctgattcaaaggcttacttaaagtacttgactttggtattgaataaactctaaata 303
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 439 ttctctgattcaaaggcttacttaaagtacttgactttggtattgaataaacgctaaata 498
Query: 304 cgctgaaatgtctgg 318
|||||||||||||||
Sbjct: 499 cgctgaaatgtctgg 513
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 716
Length adjustment: 9
Effective length of query: 312
Effective length of database: 707
Effective search space: 220584
Effective search space used: 220584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no157_j20.g1 MSMg01no157_j20.g1 CHROMAT_FILE:
MSMg01no157_j20.g1 PHD_FILE: MSMg01no157_j20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:22:59 2005
(294 letters)
>mm_chr17_64490679_64491372
Length = 694
Score = 505 bits (261), Expect = e-147
Identities = 285/293 (97%)
Strand = Plus / Minus
Query: 1 tgttttctctgtgagactcacactgaatgactgcaggctgtgtggatggatgtttgtgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 tgttttctctgtgagactcacactgaatgactgcaggctgtgtggatggatgtttgtgag 434
Query: 61 aaggtggccagctatgactcaggaaccaactctactgtccctggtaagtcttggaaaaag 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 433 aaggtggccagctatgactcaggaaccaactctactgtccctggtaagccttggaaaaag 374
Query: 121 gagaaagaatcacatgggattttcccactgtggtcctggtagcagaatgatgggctgaaa 180
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 373 gagaaagaatcacatgggattttccccctgtggtcctggtagcagaatgatgggctgaaa 314
Query: 181 aaggccaagtaattctttatcgtcttcctaagaaaacggcattgaggagaaagcttagat 240
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 313 aaggccaagtaattctttatcgtcttcctaagaaaacggcattaaggagaaagcttagat 254
Query: 241 cacacggagtccacaccaaatgcgaccatgacaggaaagttttctgtctttga 293
|||||| ||||| ||||||||| | ||||||||| ||||||||||||||||||
Sbjct: 253 cacacgaagtccgcaccaaatgtggccatgacagaaaagttttctgtctttga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 694
Length adjustment: 9
Effective length of query: 285
Effective length of database: 685
Effective search space: 195225
Effective search space used: 195225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
