Query= MSMg01no160_m05.b1 MSMg01no160_m05.b1 CHROMAT_FILE:
MSMg01no160_m05.b1 PHD_FILE: MSMg01no160_m05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:26:49 2005
(318 letters)
>mm_chr17_90260734_90261449
Length = 716
Score = 507 bits (262), Expect = e-148
Identities = 302/316 (95%), Gaps = 3/316 (0%)
Strand = Plus / Minus
Query: 4 ggaattccctgagacagctttgtagtgtcaatgtggacaactatgttttctttgagcttt 63
|||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||
Sbjct: 701 ggaattccctgagacagctttgtagtgtcaatgtggacaactgtgttttctttcagcgtt 642
Query: 64 gagtggatctgtcctttaaagcgtacacttccatttttcttatgtatttatttaggatca 123
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 641 gagtggatctgtcctttaaagcgtacacttccatttttcttatgtatttgtttaggatca 582
Query: 124 aataatttaatta-ttttcccttcttcacttttctctattctcctcttcttcctttcttc 182
|||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||||||
Sbjct: 581 tataatttaattatttttcccttcttcccttttctctattctcttcttcttcctttcttc 522
Query: 183 tcttcctctaaatcttcccatattacccacatattgttctcattttacattcatgacctc 242
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 521 tcttcctctaaatcttcccatattacccacatattgttctcattttacatttatgacctc 462
Query: 243 tctttttaactgttatggcaaacacatatacatatgcacacatattatttatgcctaaat 302
|||||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||
Sbjct: 461 tctttttaactgttatggcaaacacata--catatgcacacacattatttatacctaaat 404
Query: 303 atcactggtttagtgt 318
|||||||||| |||||
Sbjct: 403 atcactggttcagtgt 388
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 716
Length adjustment: 9
Effective length of query: 309
Effective length of database: 707
Effective search space: 218463
Effective search space used: 218463
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no160_m05.g1 MSMg01no160_m05.g1 CHROMAT_FILE:
MSMg01no160_m05.g1 PHD_FILE: MSMg01no160_m05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:26:49 2005
(105 letters)
>mm_chr17_90199964_90200468
Length = 505
Score = 180 bits (93), Expect = 2e-50
Identities = 102/105 (97%)
Strand = Plus / Plus
Query: 1 tacaaaatcttgaatttctttatttcttctttgactcagtgattaagtgatcagcagttt 60
||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 201 tacaaaatcttgaatttatttattttttctttgactcagtgattaagtgatcagcagttt 260
Query: 61 ttaattcatattattttaatgatggtagtggtagtgtgtatttgt 105
| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taaattcatattattttaatgatggtagtggtagtgtgtatttgt 305
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 105
Length of database: 505
Length adjustment: 8
Effective length of query: 97
Effective length of database: 497
Effective search space: 48209
Effective search space used: 48209
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
|
