Query= MSMg01no161_b08.b1 MSMg01no161_b08.b1 CHROMAT_FILE:
MSMg01no161_b08.b1 PHD_FILE: MSMg01no161_b08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:27:17 2005
(431 letters)
>mm_chr17_84780536_84781366
Length = 831
Score = 768 bits (397), Expect = 0.0
Identities = 406/409 (99%)
Strand = Plus / Plus
Query: 18 gaattctaataattacattttcaaaagcacaaaagcccacatactccacagctctcaatt 77
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 218 gaattctaataattacattttcaaaagcacaaaaacccacatactccacagctctcaatt 277
Query: 78 tgagttttgagaatccagttcttccttcaacaatggagtaggtaaccacagaaacttgtg 137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 tgagttttgagaatccagttcttccttcaacaatggagtaggtaaccacagaaacttgtg 337
Query: 138 gaatctgttttcctagaaaacatgaaaaacaagagaaaagtagttctgtctggcaactgc 197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 gaatctgttttcctagaaaacatgaaaaacaagagaaaagtagttctgtctggcaactgc 397
Query: 198 ttcacaatcttccaggaagcagagtgcggggcagcgtaagacactccttagaagatgctg 257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 ttcacaatcttccaggaagcagagtgcggggcagcgtaagacactccttagaagatgctg 457
Query: 258 gcacatctgtgccatcaagatagaaaaagaagtaactaaaatggttctgtcctttccaca 317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 gcacatctgtgccatcaagatagaaaaagaagtaactaaaatggttctgtcctttccaca 517
Query: 318 ctagaaagtaaagtcatgcagtgtctttccacagtcactgagatccatgtagttggttct 377
| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 518 ccagaaagtaaagtcatgcagtgtctttccacagtcactgagatccatgtagttgggtct 577
Query: 378 aataatgtttttacagacacatttccttcttacactgtacaaaatcttt 426
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 aataatgtttttacagacacatttccttcttacactgtacaaaatcttt 626
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 431
Length of database: 831
Length adjustment: 9
Effective length of query: 422
Effective length of database: 822
Effective search space: 346884
Effective search space used: 346884
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no161_b08.g1 MSMg01no161_b08.g1 CHROMAT_FILE:
MSMg01no161_b08.g1 PHD_FILE: MSMg01no161_b08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:27:18 2005
(252 letters)
>mm_chr17_84902531_84903183
Length = 653
Score = 476 bits (246), Expect = e-139
Identities = 251/253 (99%), Gaps = 1/253 (0%)
Strand = Plus / Minus
Query: 1 caggggcttgctggacttgaccttactaggtgaggggaagtctaactggctactgggcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 caggggcttgctggacttgaccttactaggtgaggggaagtctaactggctactgggcta 394
Query: 61 tatgatctcctcaggtgggacaaaggtctgtgtacactgggagatgtaggcttggggtt- 119
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 tatgatctcctcaggtgggacaaaggtctgtgtacactgggagatgtaggcttggggtta 334
Query: 120 ggggagtgtgggtgtgncaattctactcctgctgcttcatgaccagatatctggggtttg 179
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 ggggagtgtgggtgtggcaattctactcctgctgcttcatgaccagatatctggggtttg 274
Query: 180 gacacaccccgaccacactcttctccaggcttactccccacggctcctccagccccacaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 gacacaccccgaccacactcttctccaggcttactccccacggctcctccagccccacaa 214
Query: 240 cattgctgagaat 252
|||||||||||||
Sbjct: 213 cattgctgagaat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 252
Length of database: 653
Length adjustment: 9
Effective length of query: 243
Effective length of database: 644
Effective search space: 156492
Effective search space used: 156492
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
