Query= MSMg01no163_d21.b1 MSMg01no163_d21.b1 CHROMAT_FILE:
MSMg01no163_d21.b1 PHD_FILE: MSMg01no163_d21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:30:48 2005
(295 letters)
>mm_chr17_88511721_88512422
Length = 702
Score = 538 bits (278), Expect = e-157
Identities = 293/302 (97%), Gaps = 7/302 (2%)
Strand = Plus / Minus
Query: 1 cattttctagaataaaggaattgaaattcaagcctaaaggtggagagaatatgtctgaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 cattttctagaataaaggaattgaaattcaagcctaaaggtggagagaatatgtctgaat 443
Query: 61 tttaaattgcaacttctggcaaagtgttggctgtcttccttaaatcccaccagcacagct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 tttaaattgcaacttctggcaaagtgttggctgtcttccttaaatcccaccagcacagct 383
Query: 121 cttttatctctggtagaaaagaatgttcccacctgtagctatggagcaaaaatggctgtg 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 cttttatctcaggtagaaaagaatgttcccacctgtagctatggagcaaaaatggctgtg 323
Query: 181 gtgacttataggggacctcagacccacagtcatgccaagaaaacaa-------gtaatga 233
|||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 322 gtgacttataggggacctcagacccacagtcatgccaagaaaacaagcagaacgtaatga 263
Query: 234 cagctaattcatggtaatgaggacagagctaaggactttctttgatgggagcaagggtag 293
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 cagctaattcagggtaatgaggacagagctaaggactttctttgatgggagcaagggtag 203
Query: 294 ga 295
||
Sbjct: 202 ga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 295
Length of database: 702
Length adjustment: 9
Effective length of query: 286
Effective length of database: 693
Effective search space: 198198
Effective search space used: 198198
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no163_d21.g1 MSMg01no163_d21.g1 CHROMAT_FILE:
MSMg01no163_d21.g1 PHD_FILE: MSMg01no163_d21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:30:48 2005
(285 letters)
>mm_chr17_88391188_88391869
Length = 682
Score = 497 bits (257), Expect = e-145
Identities = 277/285 (97%), Gaps = 3/285 (1%)
Strand = Plus / Plus
Query: 1 agttgtgctgcaacgtattagattctataggtggggcagagtcatagagtgtatctgtgt 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 agttgtgctgcaacgtattagattctataggtggggcagagtcatagagtgtgtctgtgt 260
Query: 61 catgtgtaggctcgccagctaaggtacaaggattggacagtgttccagcaccacagtcac 120
| |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 261 cgtgtgtaggctcgccagctaaggtacaaggattagacagcgttccagcaccacagtcac 320
Query: 121 agaaaaacctaaagcaaaatgaaaatccaagaattagcaaagtgaagggaggaaggaatt 180
||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 321 agaaaaacctaaagcaaaatgaaaatccaagaattagcaaagtgacggga---aggaatt 377
Query: 181 gggtaccatagcaacacgcatactgctacatacctatcatgtctaatgaactctacatca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 gggtaccatagcaacacgcatactgctacatacctatcatgtctaatgaactctacatca 437
Query: 241 tgtccctgatggcacttcttaatgcagttcacacatatggcattt 285
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 tgtccctgatggcacttcttaatgcagttcacacatatggcattt 482
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 682
Length adjustment: 9
Effective length of query: 276
Effective length of database: 673
Effective search space: 185748
Effective search space used: 185748
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
