XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCT
CTGCCTGGCCTCATAATAACTTTGGAAATACATTCTAATCTTCTGGCTCC
TTCTCCTTCTCTGTTGTTACCTGTGTCTAGCTTGTTATCTCTGTAAGTTT
CTCTGTAAAACTGTCCCAGTAAAACTGCCATACAAAAACACCATCTACCA
CATATCAGACCACACCACTATTTTTCTCTCTCTTCTCTTAAATAGACTTA
TTTCCTCTCTGTTCTCATGTGAGTTGGGTATATCCCATTGCTGATTCATT
CTGTCAAATCCTTCTCTGATTCATTTCTTTGTCTCCCCCCAATTAGATGA
CACTTTCAAATATGGCTACAATCTACAAACTAACCTTAGGTTCATCGGTA
GGGATTAAATGTATTTACTAAGGGCATGTTTGTATTTCAGGAAGATTATA
CTATAATCCTGGGCATGTCTGCATTCCAGCCAGATCATATCTTTGGATGT
GTTCCCTTGCCAAAGTAGCCATGTTCCTGGATTAAAATTAGACTTAATTG
TTCTGAATAACATGCTTAGGTATCATATAATACTTGAATGGCTCTTTGGA
ATTTTTCCTTTGTTATAGTTAACATGGCTGTAAGGGAACTGCTTCTATAT
TTGGCATGAGAAAGGCACCTGAGTTAGCATTAGTACTGCAGGTGAGTCAT
CTTTAAAAGTAGACAGTCAGGGCTGGCAAGA

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXAGTTGTCTGTCATTTGTCTCAGCATTTCTATTG
CTGTCAAGAGACGCCATGAACATTTATAAAGTAAAATATTTAATTCAGTC
TGACCTACAGTTTTAAGAGTTTCAGTTCATTACCATTAAGGCAGGAAGCG
GAAGCATGGCAACTTTCAGGTAGATATGGGGCTGGAGAAGAAGCTTATAT
CCAGATTGGGAGACAGCAGAAGAAACTGTGAGCCACTGGCCTGGCTTGAG
CATCTGAGCCACTGGCCAACAAAGCTGCACCTATTCAAGCAAGTCCATAC
CTTTTAATAGTGCCACTCCTTGTGAGATTATGATGGGCCATTTTCTCTAA
AACCACCACATTATATTCCCTGGCCTCCATAGGCTGAACCTAGATCACAA
TAGATAAATGCATTAAATCCAAATTTAAAACTCCTTATAGTCTATAAAAG
TCCAAAGTCTCTTCTGAGGCTCATGGTTGTCTCTTAACCAGTAATCCCCT
GTTAAATCAAATCCAAAAAAGTAGATCACATATTCACAATATATAATAGC
ACAGGATGTACATTACCTAATGGAAAGGAAGAATGAAAGCATAGTGAGAA
AACACTGCACCAAAGCAAGTTCAGCTGGGCAAAATACCAGACGAAGCATC
CCCATGTCTAACGTTAAAATGTTCTTCAGATTTC

Query= MSMg01no165_o07.b1 MSMg01no165_o07.b1 CHROMAT_FILE:
MSMg01no165_o07.b1 PHD_FILE: MSMg01no165_o07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:34:14 2005
         (692 letters)



>mm_chr17_91731505_91732596
          Length = 1092

 Score =  719 bits (372), Expect = 0.0
 Identities = 387/392 (98%)
 Strand = Plus / Minus

                                                                        
Query: 301  caattagatgacactttcaaatatggctacaatctacaaactaaccttaggttcatcggt 360
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 1092 caattagatgacactttcaaatatggctacaatctacaaactaaccttaggttcattgtt 1033

                                                                        
Query: 361  agggattaaatgtatttactaagggcatgtttgtatttcaggaagattatactataatcc 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1032 agggattaaatgtatttactaagggcatgtttgtatttcaggaagattatactataatcc 973

                                                                        
Query: 421  tgggcatgtctgcattccagccagatcatatctttggatgtgttcccttgccaaagtagc 480
            ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||
Sbjct: 972  tgggcatgtctgcattccagccagatcatatatttggatgtgttcccttgccaaagcagc 913

                                                                        
Query: 481  catgttcctggattaaaattagacttaattgttctgaataacatgcttaggtatcatata 540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 912  catgttcctggattaaaattagacttaattgttctgaataacatgcttaggtatcatata 853

                                                                        
Query: 541  atacttgaatggctctttggaatttttcctttgttatagttaacatggctgtaagggaac 600
            ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 852  atacttgaatggctctttggaatttttcctttgttatagttaacacggctgtaagggaac 793

                                                                        
Query: 601  tgcttctatatttggcatgagaaaggcacctgagttagcattagtactgcaggtgagtca 660
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792  tgcttctatatttggcatgagaaaggcacctgagttagcattagtactgcaggtgagtca 733

                                            
Query: 661  tctttaaaagtagacagtcagggctggcaaga 692
            ||||||||||||||||||||||||||||||||
Sbjct: 732  tctttaaaagtagacagtcagggctggcaaga 701


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 692
Length of database: 1092
Length adjustment: 10
Effective length of query: 682
Effective length of database: 1082
Effective search space:   737924
Effective search space used:   737924
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)